8J5D
Cryo-EM structure of starch degradation complex of BAM1-LSF1-MDH
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Beta-amylase 1, chloroplastic | polymer | 499 | 56112.0 | 1 | UniProt (Q9LIR6) Pfam (PF01373) | Arabidopsis thaliana (thale cress) | BAM1,1,4-alpha-D-glucan maltohydrolase,Beta-amylase 7,Thioredoxin-regulated beta-amylase,TR-BAMY |
| 2 | B, D (B, C) | Malate dehydrogenase, chloroplastic | polymer | 323 | 34120.1 | 2 | UniProt (Q9SN86) Pfam (PF00056) Pfam (PF02866) | Arabidopsis thaliana (thale cress) | Chloroplastic malate dehydrogenase,Chloroplastic MDH,cpNAD-MDH,Plastidic NAD-dependent malate dehydrogenase,pNAD-MDH |
| 3 | C (D) | Phosphoglucan phosphatase LSF1, chloroplastic | polymer | 529 | 59231.2 | 1 | UniProt (F4J117) Pfam (PF00782) Pfam (PF16561) | Arabidopsis thaliana (thale cress) | Phosphoglucan phosphatase like sex Four1,Protein LIKE SEX4 1 |
Sequence modifications
A: 105 - 575 (UniProt: Q9LIR6)
D: 71 - 591 (UniProt: F4J117)
| PDB | External Database | Details |
|---|---|---|
| Met 77 | - | initiating methionine |
| Gly 78 | - | expression tag |
| Ser 79 | - | expression tag |
| Ser 80 | - | expression tag |
| His 81 | - | expression tag |
| His 82 | - | expression tag |
| His 83 | - | expression tag |
| His 84 | - | expression tag |
| His 85 | - | expression tag |
| His 86 | - | expression tag |
| Ser 87 | - | expression tag |
| Ser 88 | - | expression tag |
| Gly 89 | - | expression tag |
| Leu 90 | - | expression tag |
| Val 91 | - | expression tag |
| Pro 92 | - | expression tag |
| Arg 93 | - | expression tag |
| Gly 94 | - | expression tag |
| Ser 95 | - | expression tag |
| His 96 | - | expression tag |
| Ser 97 | - | expression tag |
| Asp 98 | - | expression tag |
| Glu 99 | - | expression tag |
| Val 100 | - | expression tag |
| Asp 101 | - | expression tag |
| Ala 102 | - | expression tag |
| His 103 | - | expression tag |
| Met 104 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Leu 592 | - | expression tag |
| Glu 593 | - | expression tag |
| His 594 | - | expression tag |
| His 595 | - | expression tag |
| His 596 | - | expression tag |
| His 597 | - | expression tag |
| His 598 | - | expression tag |
| His 599 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 183583.5 | |
| All* | Total formula weight | 183583.5 |
