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8IYA

Complex of SETDB1-derived peptide bound to UBE2E1

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C
(B, A, C)
Ubiquitin-conjugating enzyme E2 E1polymer17019203.83UniProt (P51965)
Pfam (PF00179)
Homo sapiens (human)(E3-independent) E2 ubiquitin-conjugating enzyme E1,E2 ubiquitin-conjugating enzyme E1,UbcH6,Ubiquitin carrier protein E1,Ubiquitin-protein ligase E1
2D, E, F
(D, E, F)
Histone-lysine N-methyltransferase SETDB1polymer6686.73UniProt (Q15047)Homo sapiens (human)ERG-associated protein with SET domain,ESET,Histone H3-K9 methyltransferase 4,H3-K9-HMTase 4,Lysine N-methyltransferase 1E,SET domain bifurcated 1
3G, H, I
(B, A, C)
SULFATE IONnon-polymer96.13Chemie (SO4)
4J, K, L, M
(B, A, C, E)
waterwater18.036Chemie (HOH)
Sequence modifications
B, A, C: 41 - 193 (UniProt: P51965)
PDBExternal DatabaseDetails
Met 24-initiating methionine
His 25-expression tag
His 26-expression tag
His 27-expression tag
His 28-expression tag
His 29-expression tag
His 30-expression tag
His 31-expression tag
His 32-expression tag
Leu 33-expression tag
Glu 34-expression tag
Val 35-expression tag
Leu 36-expression tag
Phe 37-expression tag
Gln 38-expression tag
Gly 39-expression tag
Pro 40-expression tag
Ser 67Cys 67engineered mutation
Pro 122Cys 122engineered mutation
Ser 153Cys 153engineered mutation
Pro 159Cys 159engineered mutation
D, E, F: 1 - 6 (UniProt: Q15047)
PDBExternal DatabaseDetails
Cys 1Lys 867conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight59671.6
Non-Polymers*Number of molecules3
Total formula weight288.2
All*Total formula weight59959.8
*Water molecules are not included.

246704

PDB entries from 2025-12-24

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