8IX1
Cryo-EM structure of protonated LHCII nanodisc at low pH value
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (G, N, Y) | Chlorophyll a-b binding protein, chloroplastic | polymer | 218 | 23497.5 | 3 | UniProt (P12333) Pfam (PF00504) | Spinacia oleracea (spinach) | LHCII type I CAB,LHCP |
| 2 | BA, CA, D, DA, EA... (N, G, Y) | CHLOROPHYLL B | non-polymer | 907.5 | 18 | Chemie (CHL) | |||
| 3 | AA, AB, BB, CB, DB... (N, Y, G) | CHLOROPHYLL A | non-polymer | 893.5 | 24 | Chemie (CLA) | |||
| 4 | EB, FB, LA, MA, Q... (Y, N, G) | (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL | non-polymer | 568.9 | 6 | Chemie (LUT) | |||
| 5 | NA, QA, S (N, G) | (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL | non-polymer | 600.9 | 3 | Chemie (XAT) | |||
| 6 | GB, OA, T (Y, N, G) | (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL | non-polymer | 600.9 | 3 | Chemie (NEX) | |||
| 7 | HB, PA, U (Y, N, G) | 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE | non-polymer | 723.0 | 3 | Chemie (LHG) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 70492.6 | |
| Non-Polymers* | Number of molecules | 57 |
| Total formula weight | 46965.6 | |
| All* | Total formula weight | 117458.2 |
