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8IP1

Escherichia coli OpgD mutant-D388N with beta-1,2-glucan

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Glucans biosynthesis protein Dpolymer55963899.92UniProt (P40120)
Pfam (PF04349)
Escherichia coli (strain K12)
2C
(C)
beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranosebranched1801.61In PDB
3D
(E)
beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranose-(1-2)-beta-D-glucopyranosebranched2125.81In PDB
4E, F
(A)
DI(HYDROXYETHYL)ETHERnon-polymer106.12Chemie (PEG)
5G
(B)
TRIETHYLENE GLYCOLnon-polymer150.21Chemie (PGE)
6H, I
(A, B)
waterwater18.0566Chemie (HOH)
Sequence modifications
A, B: 1 - 551 (UniProt: P40120)
PDBExternal DatabaseDetails
Asn 388Asp 388engineered mutation
Leu 552-expression tag
Glu 553-expression tag
His 554-expression tag
His 555-expression tag
His 556-expression tag
His 557-expression tag
His 558-expression tag
His 559-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight127799.9
BranchedNumber of molecules2
Total formula weight3927.4
Non-Polymers*Number of molecules3
Total formula weight362.4
All*Total formula weight132089.7
*Water molecules are not included.

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PDB entries from 2025-12-10

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