8ILF
The crystal structure of dGTPalphaSe-Sp:DNApre-II:Pol X substrate ternary complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Repair DNA polymerase X | polymer | 178 | 20579.7 | 2 | UniProt (P42494) Pfam (PF01909) Pfam (PF14791) | African swine fever virus (strain Badajoz 1971 Vero-adapted) (Ba71V ASFV) | Pol X,AsfvPolX |
| 2 | C, D, E, F (E, G, H, J) | DNA (5'-D(*CP*TP*GP*GP*AP*TP*CP*CP*A)-3') | polymer | 9 | 2715.8 | 4 | synthetic construct | ||
| 3 | G, I (A, B) | MANGANESE (II) ION | non-polymer | 54.9 | 2 | Chemie (MN) | |||
| 4 | H, J (A, B) | [[(2R,3S,5R)-5-(2-azanyl-6-oxidanylidene-1H-purin-9-yl)-3-oxidanyl-oxolan-2-yl]methoxy-selanyl-phosphoryl] phosphono hydrogen phosphate | non-polymer | 570.1 | 2 | Chemie (7Q6) | |||
| 5 | K, L, M, N, O (A, B, E, G, H) | water | water | 18.0 | 70 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 174 (UniProt: P42494)
| PDB | External Database | Details |
|---|---|---|
| Gly -3 | - | expression tag |
| Gly -2 | - | expression tag |
| Gly -1 | - | expression tag |
| Gly 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 52022.6 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 1250.2 | |
| All* | Total formula weight | 53272.8 |
