8IK6
pUbl depleted Parkin complex with pUbiquitin
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (C, A) | E3 ubiquitin-protein ligase parkin | polymer | 327 | 36802.1 | 2 | UniProt (O60260) Pfam (PF17976) Pfam (PF17978) Pfam (PF22605) | Homo sapiens (human) | Parkin,Parkin RBR E3 ubiquitin-protein ligase,Parkinson juvenile disease protein 2,Parkinson disease protein 2,Parkin R0RBR |
| 2 | B, D (D, B) | Ubiquitin | polymer | 75 | 8599.8 | 2 | UniProt (P62987) Pfam (PF00240) | Homo sapiens (human) | |
| 3 | E, F, G, H, I... (C, A) | ZINC ION | non-polymer | 65.4 | 14 | Chemie (ZN) | |||
| 4 | AA, M, N, O, P... (A, C) | SULFATE ION | non-polymer | 96.1 | 9 | Chemie (SO4) | |||
| 5 | BA, CA (D, B) | water | water | 18.0 | 2 | Chemie (HOH) |
Sequence modifications
C, A: 139 - 465 (UniProt: O60260)
| PDB | External Database | Details |
|---|---|---|
| Pro 140 | Arg 140 | engineered mutation |
| Cys 347 | Gln 347 | engineered mutation |
| Asn 383 | Ala 383 | engineered mutation |
| Leu 384 | Ser 384 | engineered mutation |
| Tyr 385 | Gly 385 | engineered mutation |
| Phe 386 | Thr 386 | engineered mutation |
| Gln 387 | Thr 387 | engineered mutation |
| Ser 388 | Thr 388 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 90803.7 | |
| Non-Polymers* | Number of molecules | 23 |
| Total formula weight | 1780.3 | |
| All* | Total formula weight | 92584.0 |
