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8IK4

Structure of DNA binding domain of McrBC endonuclease bound to hemimethylated DNA: L68F mutant

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Type IV methyl-directed restriction enzyme EcoKMcrB subunitpolymer17019693.92UniProt (P15005)
Pfam (PF12102)
Escherichia coli K-12EcoKMcrBC,5-methylcytosine-specific restriction enzyme B
2C
(C)
DNA (5'-D(*AP*GP*AP*(5CM)P*CP*GP*GP*TP*AP*G)-3')polymer134030.71DNA molecule
3D
(D)
DNA (5'-D(*CP*TP*AP*CP*CP*GP*GP*TP*CP*T)-3')polymer133927.61DNA molecule
4E, F
(C)
2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOLnon-polymer209.22Chemie (BTB)
5G, H, I, J
(A, B, C, D)
waterwater18.0223Chemie (HOH)
Sequence modifications
A, B: 1 - 161 (UniProt: P15005)
PDBExternal DatabaseDetails
Phe 68Leu 68engineered mutation
Leu 162-expression tag
Glu 163-expression tag
Gly 164-expression tag
His 165-expression tag
His 166-expression tag
His 167-expression tag
His 168-expression tag
His 169-expression tag
His 170-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight47346.1
Non-Polymers*Number of molecules2
Total formula weight418.5
All*Total formula weight47764.6
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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