8IK4
Structure of DNA binding domain of McrBC endonuclease bound to hemimethylated DNA: L68F mutant
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Type IV methyl-directed restriction enzyme EcoKMcrB subunit | polymer | 170 | 19693.9 | 2 | UniProt (P15005) Pfam (PF12102) | Escherichia coli K-12 | EcoKMcrBC,5-methylcytosine-specific restriction enzyme B |
| 2 | C (C) | DNA (5'-D(*AP*GP*AP*(5CM)P*CP*GP*GP*TP*AP*G)-3') | polymer | 13 | 4030.7 | 1 | DNA molecule | ||
| 3 | D (D) | DNA (5'-D(*CP*TP*AP*CP*CP*GP*GP*TP*CP*T)-3') | polymer | 13 | 3927.6 | 1 | DNA molecule | ||
| 4 | E, F (C) | 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | non-polymer | 209.2 | 2 | Chemie (BTB) | |||
| 5 | G, H, I, J (A, B, C, D) | water | water | 18.0 | 223 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 161 (UniProt: P15005)
| PDB | External Database | Details |
|---|---|---|
| Phe 68 | Leu 68 | engineered mutation |
| Leu 162 | - | expression tag |
| Glu 163 | - | expression tag |
| Gly 164 | - | expression tag |
| His 165 | - | expression tag |
| His 166 | - | expression tag |
| His 167 | - | expression tag |
| His 168 | - | expression tag |
| His 169 | - | expression tag |
| His 170 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 47346.1 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 418.5 | |
| All* | Total formula weight | 47764.6 |






