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8IGN

Crystal structure of SARS-CoV-2 main protease in complex with RAY1216

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(B, A)
3C-like proteinase nsp5polymer30633825.52UniProt (P0DTC1)
Pfam (PF05409)
UniProt (by SIFTS) (P0DTD1)
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV SARS-CoV-2)3CL-PRO,3CLp,Main protease,Mpro,Non-structural protein 5,nsp5,SARS coronavirus main proteinase
2C, D
(B, A)
(3~{S},3~{a}~{S},6~{a}~{R})-2-[(2~{S})-2-cyclohexyl-2-[2,2,2-tris(fluoranyl)ethanoylamino]ethanoyl]-~{N}-[(2~{S},3~{R})-4-(cyclopentylamino)-3-oxidanyl-4-oxidanylidene-1-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]butan-2-yl]-3,3~{a},4,5,6,6~{a}-hexahydro-1~{H}-cyclopenta[c]pyrrole-3-carboxamidenon-polymer641.72Chemie (7ON)
3E, F
(B, A)
waterwater18.0255Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight67651.1
Non-Polymers*Number of molecules2
Total formula weight1283.4
All*Total formula weight68934.5
*Water molecules are not included.

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PDB entries from 2025-06-11

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