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8IDT

human nuclear pre-60S ribosomal particle - State G

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
155S rRNApolymer12038691.91GenBank (NR_023363)Homo sapiens (human)
26Eukaryotic translation initiation factor 6polymer24526620.01UniProt (P56537)
Pfam (PF01912)
In PDB
Homo sapiens (human)eIF-6,B(2)GCN homolog,B4 integrin interactor,CAB,p27(BBP)
37Probable ribosome biogenesis protein RLP24polymer16319666.31UniProt (Q9UHA3)
Pfam (PF01246)
In PDB
Homo sapiens (human)Ribosomal L24 domain-containing protein 1,Ribosomal protein L24-like
485.8S rRNApolymer15650157.71GenBank (KY962518)Homo sapiens (human)
59Zinc finger protein 593polymer13415230.21UniProt (O00488)
Pfam (PF12171)
In PDB
Homo sapiens (human)Zinc finger protein T86
6B60S ribosomal protein L3polymer40346211.11UniProt (P39023)
Pfam (PF00297)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL3
7C60S ribosomal protein L29polymer15917804.31UniProt (P47914)
Pfam (PF01779)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL29
8D60S ribosomal protein L4polymer42747804.61UniProt (P36578)
Pfam (PF00573)
Pfam (PF14374)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL4
9E60S ribosomal protein L30polymer11512805.11UniProt (P62888)
Pfam (PF01248)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL30
10F60S ribosomal protein L34polymer11713326.11UniProt (P49207)
Pfam (PF01199)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL34
11G60S ribosomal protein L7apolymer26630061.81UniProt (P62424)
Pfam (PF01248)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL8
12H60S ribosomal protein L35polymer12314593.61UniProt (P42766)
Pfam (PF00831)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL29
13I60S ribosomal protein L9polymer19221899.51UniProt (P32969)
Pfam (PF00347)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL6
14K60S ribosomal protein L36polymer10512290.91UniProt (Q9Y3U8)
Pfam (PF01158)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL36
15L60S ribosomal protein L27apolymer14816604.51UniProt (P46776)
Pfam (PF00828)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL15
16M60S ribosomal protein L37polymer9711111.01UniProt (P61927)
Pfam (PF01907)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL37
17N60S ribosomal protein L11polymer17820288.51UniProt (P62913)
Pfam (PF00281)
Pfam (PF00673)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL5
18O60S ribosomal protein L38polymer708238.91UniProt (P63173)
Pfam (PF01781)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL38
19P60S ribosomal protein L39polymer516426.81UniProt (P62891)
Pfam (PF00832)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL39
20Q60S ribosomal protein L13polymer21124321.71UniProt (P26373)
Pfam (PF01294)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL13
21S60S ribosomal protein L14polymer21523485.01UniProt (P50914)
Pfam (PF01929)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL14
22U60S ribosomal protein L15polymer20424207.31UniProt (P61313)
Pfam (PF00827)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL15
23V60S ribosomal protein L13apolymer20323633.41UniProt (P40429)
Pfam (PF00572)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL13
24W60S ribosomal protein L36apolymer10612477.01UniProt (P83881)
Pfam (PF00935)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL42
25X60S ribosomal protein L37apolymer9210299.41UniProt (P61513)
Pfam (PF01780)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL43
26Z60S ribosomal protein L18polymer18821687.71UniProt (Q07020)
Pfam (PF17135)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL18
27a60S ribosomal protein L19polymer19623535.31UniProt (P84098)
Pfam (PF01280)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL19
28b60S ribosomal protein L18apolymer17620808.51UniProt (Q02543)
Pfam (PF01775)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL20
29c60S ribosomal protein L21polymer16018610.01UniProt (P46778)
Pfam (PF01157)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL21
30e60S ribosomal protein L23polymer14014892.51UniProt (P62829)
Pfam (PF00238)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL14
31g60S ribosomal protein L23apolymer15617740.21UniProt (P62750)
Pfam (PF03939)
Pfam (PF00276)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL23
32h60S ribosomal protein L26polymer14517303.41UniProt (P61254)
Pfam (PF16906)
Pfam (PF00467)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL24
33i60S ribosomal protein L27polymer13615835.81UniProt (P61353)
Pfam (PF00467)
Pfam (PF01777)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL27
34l60S ribosomal protein L28polymer13715784.61UniProt (P46779)
Pfam (PF01778)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL28
35m60S ribosomal protein L8polymer25728088.91UniProt (P62917)
Pfam (PF00181)
Pfam (PF03947)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL2
36n60S ribosomal protein L35apolymer11012564.71UniProt (P18077)
Pfam (PF01247)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL33
37o60S ribosomal protein L6polymer28832810.21UniProt (Q02878)
Pfam (PF03868)
Pfam (PF01159)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL6
38p60S ribosomal protein L7polymer24829291.01UniProt (P18124)
Pfam (PF08079)
Pfam (PF00327)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL30
39r60S ribosomal protein L5polymer29734426.81UniProt (P46777)
Pfam (PF17144)
Pfam (PF14204)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL18
40AG Protein Nucleolar 2polymer73183796.11UniProt (Q13823)
Pfam (PF08153)
Pfam (PF01926)
In PDB
Homo sapiens (human)Autoantigen NGP-1
41RTranslation machinery-associated protein 16polymer20323912.41UniProt (Q96EY4)
Pfam (PF11176)
In PDB
Homo sapiens (human)
42JmRNA turnover protein 4 homologpolymer23927602.51UniProt (Q9UKD2)
Pfam (PF00466)
Pfam (PF17777)
In PDB
Homo sapiens (human)Ribosome assembly factor MRTO4
43TLeydig cell tumor 10 kDa protein homologpolymer9910605.71UniProt (Q9UNZ5)
Pfam (PF09495)
In PDB
Homo sapiens (human)
44228S rRNApolymer50541636695.01Homo sapiens
45y60S ribosomal protein L12polymer16517847.61UniProt (P30050)
Pfam (PF03946)
Pfam (PF00298)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL11
464GTP-binding protein 4polymer63474107.81UniProt (Q9BZE4)
Pfam (PF17835)
Pfam (PF06858)
Pfam (PF08155)
In PDB
Homo sapiens (human)Chronic renal failure gene protein,GTP-binding protein NGB
47d60S ribosomal protein L22polymer12814813.01UniProt (P35268)
Pfam (PF01776)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL22
48j60S ribosomal protein L31polymer12514494.91UniProt (P62899)
Pfam (PF01198)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL31
49k60S ribosomal protein L32polymer13515898.91UniProt (P62910)
Pfam (PF01655)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL32
50Y60S ribosomal protein L17polymer18421443.21UniProt (P18621)
Pfam (PF00237)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL22
51zProtein LLP homologpolymer12915268.41UniProt (Q9BRT6)
Pfam (PF10169)
In PDB
Homo sapiens (human)Protein LAPS18-like
52AGUANOSINE-5'-DIPHOSPHATEnon-polymer443.21Chemie (GDP)
53A, 4MAGNESIUM IONnon-polymer24.32Chemie (MG)
54APOTASSIUM IONnon-polymer39.11Chemie (K)
554GUANOSINE-5'-TRIPHOSPHATEnon-polymer523.21Chemie (GTP)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains51
Total formula weight2808121.5
Non-Polymers*Number of molecules5
Total formula weight1054.1
All*Total formula weight2809175.6
*Water molecules are not included.

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PDB entries from 2024-07-24

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