8IC3
Respiratory complex Peripheral Arm of CI, focus-refined map of type I, PERK -/- mouse under cold temperature
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | NADH-ubiquinone oxidoreductase chain 3 | polymer | 115 | 13223.8 | 1 | UniProt (P03899) Pfam (PF00507) In PDB | Mus musculus (house mouse) | NADH dehydrogenase subunit 3 |
| 2 | B | NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial | polymer | 224 | 24715.9 | 1 | UniProt (Q9DC70) Pfam (PF01058) In PDB | Mus musculus (house mouse) | Complex I-20kD,CI-20kD,NADH-ubiquinone oxidoreductase 20 kDa subunit |
| 3 | C | NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial | polymer | 263 | 30191.3 | 1 | UniProt (Q9DCT2) Pfam (PF00329) In PDB | Mus musculus (house mouse) | Complex I-30kD,CI-30kD,NADH-ubiquinone oxidoreductase 30 kDa subunit |
| 4 | D | NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial | polymer | 463 | 52693.6 | 1 | UniProt (Q91WD5) Pfam (PF00346) In PDB | Mus musculus (house mouse) | Complex I-49kD,CI-49kD,NADH-ubiquinone oxidoreductase 49 kDa subunit |
| 5 | E | NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial | polymer | 248 | 27318.3 | 1 | UniProt (Q9D6J6) Pfam (PF01257) In PDB | Mus musculus (house mouse) | NADH-ubiquinone oxidoreductase 24 kDa subunit |
| 6 | F | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial | polymer | 464 | 50904.2 | 1 | UniProt (Q91YT0) Pfam (PF01512) Pfam (PF22461) Pfam (PF10589) In PDB | Mus musculus (house mouse) | Complex I-51kD,CI-51kD,NADH-ubiquinone oxidoreductase 51 kDa subunit |
| 7 | G | NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial | polymer | 727 | 79866.7 | 1 | UniProt (Q91VD9) Pfam (PF10588) Pfam (PF22117) Pfam (PF22151) Pfam (PF00384) Pfam (PF09326) Pfam (PF13510) In PDB | Mus musculus (house mouse) | Complex I-75kD,CI-75kD |
| 8 | H | NADH-ubiquinone oxidoreductase chain 1 | polymer | 318 | 36077.0 | 1 | UniProt (P03888) Pfam (PF00146) In PDB | Mus musculus (house mouse) | NADH dehydrogenase subunit 1 |
| 9 | I | NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial | polymer | 212 | 24068.4 | 1 | UniProt (Q8K3J1) Pfam (PF12838) In PDB | Mus musculus (house mouse) | Complex I-23kD,CI-23kD,NADH-ubiquinone oxidoreductase 23 kDa subunit |
| 10 | P | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial | polymer | 377 | 42588.1 | 1 | UniProt (Q9DC69) Pfam (PF05368) In PDB | Mus musculus (house mouse) | Complex I-39kD,CI-39kD,NADH-ubiquinone oxidoreductase 39 kDa subunit |
| 11 | Q | NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial | polymer | 175 | 19814.7 | 1 | UniProt (Q9CXZ1) Pfam (PF04800) In PDB | Mus musculus (house mouse) | Complex I-18 kDa,CI-18 kDa,Complex I-AQDQ,CI-AQDQ,NADH-ubiquinone oxidoreductase 18 kDa subunit |
| 12 | R | NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial | polymer | 116 | 13041.8 | 1 | UniProt (P52503) Pfam (PF10276) In PDB | Mus musculus (house mouse) | Complex I-13kD-A,CI-13kD-A,NADH-ubiquinone oxidoreductase 13 kDa-A subunit |
| 13 | S | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 | polymer | 99 | 10932.7 | 1 | UniProt (Q9CQ75) Pfam (PF05047) In PDB | Mus musculus (house mouse) | Complex I-B8,CI-B8,NADH-ubiquinone oxidoreductase B8 subunit |
| 14 | T | Acyl carrier protein, mitochondrial | polymer | 156 | 17390.3 | 1 | UniProt (Q9CR21) Pfam (PF00550) In PDB | Mus musculus (house mouse) | ACP,CI-SDAP,NADH-ubiquinone oxidoreductase 9.6 kDa subunit |
| 15 | V | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 | polymer | 116 | 13380.7 | 1 | UniProt (Q9CPP6) Pfam (PF04716) In PDB | Mus musculus (house mouse) | Complex I subunit B13,Complex I-13kD-B,CI-13kD-B,NADH-ubiquinone oxidoreductase 13 kDa-B subunit |
| 16 | W | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 | polymer | 131 | 15311.9 | 1 | UniProt (Q9CQZ5) Pfam (PF13233) In PDB | Mus musculus (house mouse) | Complex I-B14,CI-B14,NADH-ubiquinone oxidoreductase B14 subunit |
| 17 | X | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 | polymer | 172 | 20025.1 | 1 | UniProt (Q9DCJ5) Pfam (PF06747) In PDB | Mus musculus (house mouse) | Complex I-19kD,CI-19kD,Complex I-PGIV,CI-PGIV,NADH-ubiquinone oxidoreductase 19 kDa subunit |
| 18 | Z | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 | polymer | 144 | 16881.6 | 1 | UniProt (Q9ERS2) Pfam (PF06212) In PDB | Mus musculus (house mouse) | Cell death regulatory protein GRIM-19,Complex I-B16.6,CI-B16.6,Gene associated with retinoic and interferon-induced mortality 19 protein,GRIM-19,Gene associated with retinoic and IFN-induced mortality 19 protein,NADH-ubiquinone oxidoreductase B16.6 subunit |
| 19 | a | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 | polymer | 70 | 8149.5 | 1 | UniProt (O35683) Pfam (PF15879) In PDB | Mus musculus (house mouse) | Complex I-MWFE,CI-MWFE,NADH-ubiquinone oxidoreductase MWFE subunit |
| 20 | b | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3 | polymer | 84 | 9338.9 | 1 | UniProt (Q9CQ91) Pfam (PF14987) In PDB | Mus musculus (house mouse) | Complex I-B9,CI-B9,NADH-ubiquinone oxidoreductase B9 subunit |
| 21 | q | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 | polymer | 145 | 17112.4 | 1 | UniProt (Q7TMF3) Pfam (PF05071) In PDB | Mus musculus (house mouse) | Complex I-B17.2,CI-B17.2,CIB17.2,NADH-ubiquinone oxidoreductase subunit B17.2 |
| 22 | r | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 | polymer | 113 | 12595.6 | 1 | UniProt (Q9Z1P6) Pfam (PF07347) In PDB | Mus musculus (house mouse) | Complex I-B14.5a,CI-B14.5a,NADH-ubiquinone oxidoreductase subunit B14.5a |
| 23 | s | NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial | polymer | 104 | 11833.5 | 1 | UniProt (Q8BK30) Pfam (PF15880) In PDB | Mus musculus (house mouse) | Complex I-9kD,CI-9kD,NADH-ubiquinone oxidoreductase 9 kDa subunit |
| 24 | F, G, I, B | IRON/SULFUR CLUSTER | non-polymer | 351.6 | 6 | Chemie (SF4) | |||
| 25 | B | UBIQUINONE-1 | non-polymer | 250.3 | 1 | Chemie (UQ1) | |||
| 26 | I, B | 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE | non-polymer | 790.1 | 2 | Chemie (PC1) | |||
| 27 | E, G | FE2/S2 (INORGANIC) CLUSTER | non-polymer | 175.8 | 2 | Chemie (FES) | |||
| 28 | F | FLAVIN MONONUCLEOTIDE | non-polymer | 456.3 | 1 | Chemie (FMN) | |||
| 29 | H | Ubiquinone-9 | non-polymer | 795.2 | 1 | Chemie (UQ9) | |||
| 30 | H | 1,2-Distearoyl-sn-glycerophosphoethanolamine | non-polymer | 748.1 | 2 | Chemie (3PE) | |||
| 31 | P | NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | non-polymer | 745.4 | 1 | Chemie (NDP) | |||
| 32 | R | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 33 | W | ~{S}-[2-[3-[[(2~{R})-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] (3~{S})-3-oxidanyltetradecanethioate | non-polymer | 584.7 | 1 | Chemie (EHZ) | |||
| 34 | q | CARDIOLIPIN | non-polymer | 1464.0 | 1 | Chemie (CDL) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 23 |
| Total formula weight | 567455.9 | |
| Non-Polymers* | Number of molecules | 19 |
| Total formula weight | 9899.3 | |
| All* | Total formula weight | 577355.3 |
