8IA2
Structure of C5a bound human C5aR1 in complex with Go (Composite map)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | C5a anaphylatoxin chemotactic receptor 1 | polymer | 406 | 45273.9 | 1 | UniProt (P21730) Pfam (PF00001) | Homo sapiens (human) | C5a anaphylatoxin chemotactic receptor,C5a-R,C5aR |
| 2 | B (D) | C5a anaphylatoxin | polymer | 74 | 8288.7 | 1 | UniProt (P01031) Pfam (PF01821) | Homo sapiens (human) | |
| 3 | C (B) | Guanine nucleotide-binding protein G(o) subunit alpha | polymer | 250 | 28193.9 | 1 | UniProt (P09471) Pfam (PF00503) | Homo sapiens (human) | |
| 4 | D (C) | Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 | polymer | 350 | 38534.1 | 1 | UniProt (P62873) Pfam (PF00400) | Homo sapiens (human) | Transducin beta chain 1 |
| 5 | E (G) | Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 | polymer | 71 | 7861.1 | 1 | UniProt (P59768) Pfam (PF00631) | Homo sapiens (human) | G gamma-I |
| 6 | F (H) | Antibody fragment - ScFv16 | polymer | 248 | 26466.5 | 1 | Mus musculus |
Sequence modifications
A: 2 - 350 (UniProt: P21730)
B: 4 - 173 (UniProt: P09471)
B: 182 - 354 (UniProt: P09471)
C: 2 - 340 (UniProt: P62873)
| PDB | External Database | Details |
|---|---|---|
| Met -55 | - | initiating methionine |
| Gly -54 | - | expression tag |
| Lys -53 | - | expression tag |
| Thr -52 | - | expression tag |
| Ile -51 | - | expression tag |
| Ile -50 | - | expression tag |
| Ala -49 | - | expression tag |
| Leu -48 | - | expression tag |
| Ser -47 | - | expression tag |
| Tyr -46 | - | expression tag |
| Ile -45 | - | expression tag |
| Phe -44 | - | expression tag |
| Cys -43 | - | expression tag |
| Leu -42 | - | expression tag |
| Val -41 | - | expression tag |
| Phe -40 | - | expression tag |
| Ala -39 | - | expression tag |
| Asp -38 | - | expression tag |
| Tyr -37 | - | expression tag |
| Lys -36 | - | expression tag |
| Asp -35 | - | expression tag |
| Asp -34 | - | expression tag |
| Asp -33 | - | expression tag |
| Asp -32 | - | expression tag |
| Ala -31 | - | expression tag |
| Ala -30 | - | expression tag |
| Asn -29 | - | expression tag |
| Phe -28 | - | expression tag |
| Thr -27 | - | expression tag |
| Pro -26 | - | expression tag |
| Val -25 | - | expression tag |
| Asn -24 | - | expression tag |
| Gly -23 | - | expression tag |
| Ser -22 | - | expression tag |
| Ser -21 | - | expression tag |
| Gly -20 | - | expression tag |
| Asn -19 | - | expression tag |
| Gln -18 | - | expression tag |
| Ser -17 | - | expression tag |
| Val -16 | - | expression tag |
| Arg -15 | - | expression tag |
| Leu -14 | - | expression tag |
| Val -13 | - | expression tag |
| Thr -12 | - | expression tag |
| Ser -11 | - | expression tag |
| Ser -10 | - | expression tag |
| Ser -9 | - | expression tag |
| Leu -8 | - | expression tag |
| Glu -7 | - | expression tag |
| Val -6 | - | expression tag |
| Leu -5 | - | expression tag |
| Phe -4 | - | expression tag |
| Gln -3 | - | expression tag |
| Gly -2 | - | expression tag |
| Pro -1 | - | expression tag |
| Gly 0 | - | expression tag |
| Ser 1 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Met -11 | - | initiating methionine |
| Gly -10 | - | expression tag |
| His -9 | - | expression tag |
| His -8 | - | expression tag |
| His -7 | - | expression tag |
| His -6 | - | expression tag |
| His -5 | - | expression tag |
| His -4 | - | expression tag |
| Glu -3 | - | expression tag |
| Asn -2 | - | expression tag |
| Leu -1 | - | expression tag |
| Tyr 0 | - | expression tag |
| Phe 1 | - | expression tag |
| Gln 2 | - | expression tag |
| Gly 3 | - | expression tag |
| Asp 42 | Gly 42 | engineered mutation |
| Asn 43 | Glu 43 | engineered mutation |
| PDB | External Database | Details |
|---|---|---|
| Gly 174 | - | linker |
| Gly 175 | - | linker |
| Ser 176 | - | linker |
| Gly 177 | - | linker |
| Gly 178 | - | linker |
| Ser 179 | - | linker |
| Gly 180 | - | linker |
| Gly 181 | - | linker |
| Asp 227 | Ala 227 | engineered mutation |
| Asp 230 | Gly 230 | engineered mutation |
| Ala 332 | Ile 332 | engineered mutation |
| Ile 335 | Val 335 | engineered mutation |
| PDB | External Database | Details |
|---|---|---|
| Met -9 | - | initiating methionine |
| His -8 | - | expression tag |
| His -7 | - | expression tag |
| His -6 | - | expression tag |
| His -5 | - | expression tag |
| His -4 | - | expression tag |
| His -3 | - | expression tag |
| Gly -2 | - | expression tag |
| Ser -1 | - | expression tag |
| Ser 0 | - | expression tag |
| Gly 1 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 154618.2 | |
| All* | Total formula weight | 154618.2 |






