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8I8F

Crystal structure of NDM-1 at pH5.5 (Succinate) in complex with hydrolyzed compound 1

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Metallo beta lactamase NDM-1polymer27028527.42UniProt (E9NWK5)
Pfam (PF00753)
Klebsiella pneumoniaeMetallo beta-lactamase,Metallo-beta-lactamase NDM1,Metallobetalactamase NDM-1,NDM-1,NDM1 metallo-beta-lactamase,New Delhi Metallo carbapenemase-1,New Delhi metallo-beta-lactamase NDM-1,New Delhi metallo-beta-lactamse 1
2C, D, F, G
(A, B)
ZINC IONnon-polymer65.44Chemie (ZN)
3E, H
(A, B)
(2R,4S)-5,5-dimethyl-2-[(1R)-1-(2-naphthalen-1-yloxyethanoylamino)-2-oxidanyl-2-oxidanylidene-ethyl]-1,3-thiazolidine-4-carboxylic acidnon-polymer418.52Chemie (OL6)
4I, J
(A, B)
waterwater18.0558Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight57054.9
Non-Polymers*Number of molecules6
Total formula weight1098.6
All*Total formula weight58153.4
*Water molecules are not included.

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PDB entries from 2024-11-06

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