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8I6B

Crystal structure of Mycobacterium tuberculosis Uracil-DNA glycosylase in complex with 5-Hydroxy-2,4(1H,3H)-pyrimidinedione, Form I

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Uracil-DNA glycosylasepolymer23825813.51UniProt (P9WFQ9)
Pfam (PF03167)
Mycobacterium tuberculosis H37RvUDG
2B
(A)
5-oxidanyl-1~{H}-pyrimidine-2,4-dionenon-polymer128.11Chemie (ODF)
3C
(A)
1,2-ETHANEDIOLnon-polymer62.11Chemie (EDO)
4D, E, F, G, H
(A)
DIMETHYL SULFOXIDEnon-polymer78.15Chemie (DMS)
5I
(A)
SODIUM IONnon-polymer23.01Chemie (NA)
6J, K, L
(A)
CHLORIDE IONnon-polymer35.53Chemie (CL)
7M
(A)
waterwater18.0280Chemie (HOH)
Sequence modifications
A: 1 - 227 (UniProt: P9WFQ9)
PDBExternal DatabaseDetails
Met -10-expression tag
His -9-expression tag
His -8-expression tag
His -7-expression tag
His -6-expression tag
His -5-expression tag
His -4-expression tag
Gly -3-expression tag
Met -2-expression tag
Ala -1-expression tag
Ser 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight25813.5
Non-Polymers*Number of molecules11
Total formula weight710.2
All*Total formula weight26523.7
*Water molecules are not included.

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PDB entries from 2025-10-15

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