8I4G
Omicron spike variant BQ.1.1 with n3130v-Fc
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | C | n3130v-Fc | polymer | 383 | 42016.8 | 1 | Homo sapiens | ||
2 | A | Spike glycoprotein | polymer | 1294 | 143053.5 | 1 | UniProt (P0DTC2) Pfam (PF16451) Pfam (PF09408) Pfam (PF19209) Pfam (PF01601) In PDB | Severe acute respiratory syndrome coronavirus 2 | S glycoprotein,E2,Peplomer protein |
Sequence modifications
A: 36 - 1214 (UniProt: P0DTC2)
PDB | External Database | Details |
---|---|---|
Met 1 | - | initiating methionine |
Pro 2 | - | expression tag |
Met 3 | - | expression tag |
Gly 4 | - | expression tag |
Ser 5 | - | expression tag |
Leu 6 | - | expression tag |
Gln 7 | - | expression tag |
Pro 8 | - | expression tag |
Leu 9 | - | expression tag |
Ala 10 | - | expression tag |
Thr 11 | - | expression tag |
Leu 12 | - | expression tag |
Tyr 13 | - | expression tag |
Leu 14 | - | expression tag |
Leu 15 | - | expression tag |
Gly 16 | - | expression tag |
Met 17 | - | expression tag |
Leu 18 | - | expression tag |
Val 19 | - | expression tag |
Ala 20 | - | expression tag |
Ser 21 | - | expression tag |
Val 22 | - | expression tag |
Leu 23 | - | expression tag |
Ala 24 | - | expression tag |
Gln 25 | - | expression tag |
Cys 26 | - | expression tag |
Val 27 | - | expression tag |
Asn 28 | - | expression tag |
Leu 29 | - | expression tag |
Ile 30 | - | expression tag |
Thr 31 | - | expression tag |
Arg 32 | - | expression tag |
Thr 33 | - | expression tag |
Gln 34 | - | expression tag |
Ser 35 | - | expression tag |
- | His 69 | deletion |
- | Val 70 | deletion |
Asp 148 | Gly 142 | variant |
Gly 219 | Val 213 | variant |
Asp 345 | Gly 339 | variant |
Thr 352 | Arg 346 | variant |
Phe 377 | Ser 371 | variant |
Pro 379 | Ser 373 | variant |
Phe 381 | Ser 375 | variant |
Ala 382 | Thr 376 | variant |
Asn 411 | Asp 405 | variant |
Ser 414 | Arg 408 | variant |
Asn 423 | Lys 417 | variant |
Lys 446 | Asn 440 | variant |
Thr 450 | Lys 444 | variant |
Arg 458 | Leu 452 | variant |
Lys 466 | Asn 460 | variant |
Asn 483 | Ser 477 | variant |
Lys 484 | Thr 478 | variant |
Ala 490 | Glu 484 | variant |
Val 492 | Phe 486 | variant |
Arg 504 | Gln 498 | variant |
Tyr 507 | Asn 501 | variant |
His 511 | Tyr 505 | variant |
Gly 620 | Asp 614 | variant |
Tyr 661 | His 655 | variant |
Lys 685 | Asn 679 | variant |
His 687 | Pro 681 | conflict |
Gly 688 | Arg 682 | engineered mutation |
Ser 689 | Arg 683 | engineered mutation |
Ser 691 | Arg 685 | engineered mutation |
Lys 770 | Asn 764 | variant |
Tyr 802 | Asp 796 | variant |
His 960 | Gln 954 | variant |
Lys 975 | Asn 969 | variant |
Gly 1215 | - | expression tag |
Ser 1216 | - | expression tag |
Gly 1217 | - | expression tag |
Tyr 1218 | - | expression tag |
Ile 1219 | - | expression tag |
Pro 1220 | - | expression tag |
Glu 1221 | - | expression tag |
Ala 1222 | - | expression tag |
Pro 1223 | - | expression tag |
Arg 1224 | - | expression tag |
Asp 1225 | - | expression tag |
Gly 1226 | - | expression tag |
Gln 1227 | - | expression tag |
Ala 1228 | - | expression tag |
Tyr 1229 | - | expression tag |
Val 1230 | - | expression tag |
Arg 1231 | - | expression tag |
Lys 1232 | - | expression tag |
Asp 1233 | - | expression tag |
Gly 1234 | - | expression tag |
Glu 1235 | - | expression tag |
Trp 1236 | - | expression tag |
Val 1237 | - | expression tag |
Phe 1238 | - | expression tag |
Leu 1239 | - | expression tag |
Ser 1240 | - | expression tag |
Thr 1241 | - | expression tag |
Phe 1242 | - | expression tag |
Leu 1243 | - | expression tag |
Ser 1244 | - | expression tag |
Gly 1245 | - | expression tag |
Leu 1246 | - | expression tag |
Glu 1247 | - | expression tag |
Val 1248 | - | expression tag |
Leu 1249 | - | expression tag |
Phe 1250 | - | expression tag |
Gln 1251 | - | expression tag |
Gly 1252 | - | expression tag |
Pro 1253 | - | expression tag |
Gly 1254 | - | expression tag |
Gly 1255 | - | expression tag |
Trp 1256 | - | expression tag |
Ser 1257 | - | expression tag |
His 1258 | - | expression tag |
Pro 1259 | - | expression tag |
Gln 1260 | - | expression tag |
Phe 1261 | - | expression tag |
Glu 1262 | - | expression tag |
Lys 1263 | - | expression tag |
Gly 1264 | - | expression tag |
Gly 1265 | - | expression tag |
Gly 1266 | - | expression tag |
Ser 1267 | - | expression tag |
Gly 1268 | - | expression tag |
Gly 1269 | - | expression tag |
Gly 1270 | - | expression tag |
Ser 1271 | - | expression tag |
Gly 1272 | - | expression tag |
Gly 1273 | - | expression tag |
Ser 1274 | - | expression tag |
Ala 1275 | - | expression tag |
Trp 1276 | - | expression tag |
Ser 1277 | - | expression tag |
His 1278 | - | expression tag |
Pro 1279 | - | expression tag |
Gln 1280 | - | expression tag |
Phe 1281 | - | expression tag |
Glu 1282 | - | expression tag |
Lys 1283 | - | expression tag |
Gly 1284 | - | expression tag |
Gly 1285 | - | expression tag |
Ser 1286 | - | expression tag |
His 1287 | - | expression tag |
His 1288 | - | expression tag |
His 1289 | - | expression tag |
His 1290 | - | expression tag |
His 1291 | - | expression tag |
His 1292 | - | expression tag |
His 1293 | - | expression tag |
His 1294 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 185070.3 | |
All* | Total formula weight | 185070.3 |