8I4F

Omicron spike variant XBB with n3130v-Fc

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A (A)	Spike glycoprotein	polymer	1295	143393.9	1	UniProt (P0DTC2) Pfam (PF16451) Pfam (PF09408) Pfam (PF19209) Pfam (PF01601)	Severe acute respiratory syndrome coronavirus 2	S glycoprotein,E2,Peplomer protein
2	B (C)	n3130v-Fc	polymer	383	42016.8	1		Homo sapiens

Sequence modifications

A: 36 - 1215 (UniProt: P0DTC2)

PDB	External Database	Details
Met 1	-	initiating methionine
Pro 2	-	expression tag
Met 3	-	expression tag
Gly 4	-	expression tag
Ser 5	-	expression tag
Leu 6	-	expression tag
Gln 7	-	expression tag
Pro 8	-	expression tag
Leu 9	-	expression tag
Ala 10	-	expression tag
Thr 11	-	expression tag
Leu 12	-	expression tag
Tyr 13	-	expression tag
Leu 14	-	expression tag
Leu 15	-	expression tag
Gly 16	-	expression tag
Met 17	-	expression tag
Leu 18	-	expression tag
Val 19	-	expression tag
Ala 20	-	expression tag
Ser 21	-	expression tag
Val 22	-	expression tag
Leu 23	-	expression tag
Ala 24	-	expression tag
Gln 25	-	expression tag
Cys 26	-	expression tag
Val 27	-	expression tag
Asn 28	-	expression tag
Leu 29	-	expression tag
Ile 30	-	expression tag
Thr 31	-	expression tag
Arg 32	-	expression tag
Thr 33	-	expression tag
Gln 34	-	expression tag
Ser 35	-	expression tag
Asp 150	Gly 142	variant
-	Tyr 144	deletion
Gln 153	His 146	variant
Glu 190	Gln 183	variant
Glu 220	Val 213	variant
His 346	Gly 339	variant
Thr 353	Arg 346	variant
Ile 375	Leu 368	variant
Phe 378	Ser 371	variant
Pro 380	Ser 373	variant
Phe 382	Ser 375	variant
Ala 383	Thr 376	variant
Asn 412	Asp 405	variant
Ser 415	Arg 408	variant
Asn 424	Lys 417	variant
Lys 447	Asn 440	variant
Pro 452	Val 445	variant
Ser 453	Gly 446	variant
Lys 467	Asn 460	variant
Asn 484	Ser 477	variant
Lys 485	Thr 478	variant
Ala 491	Glu 484	variant
Ser 493	Phe 486	variant
Ser 497	Phe 490	variant
Arg 505	Gln 498	variant
Tyr 508	Asn 501	variant
His 512	Tyr 505	variant
Gly 621	Asp 614	variant
Tyr 662	His 655	variant
Lys 686	Asn 679	variant
His 688	Pro 681	variant
Lys 771	Asn 764	variant
Tyr 803	Asp 796	variant
His 961	Gln 954	variant
Lys 976	Asn 969	variant
Gly 1216	-	expression tag
Ser 1217	-	expression tag
Gly 1218	-	expression tag
Tyr 1219	-	expression tag
Ile 1220	-	expression tag
Pro 1221	-	expression tag
Glu 1222	-	expression tag
Ala 1223	-	expression tag
Pro 1224	-	expression tag
Arg 1225	-	expression tag
Asp 1226	-	expression tag
Gly 1227	-	expression tag
Gln 1228	-	expression tag
Ala 1229	-	expression tag
Tyr 1230	-	expression tag
Val 1231	-	expression tag
Arg 1232	-	expression tag
Lys 1233	-	expression tag
Asp 1234	-	expression tag
Gly 1235	-	expression tag
Glu 1236	-	expression tag
Trp 1237	-	expression tag
Val 1238	-	expression tag
Phe 1239	-	expression tag
Leu 1240	-	expression tag
Ser 1241	-	expression tag
Thr 1242	-	expression tag
Phe 1243	-	expression tag
Leu 1244	-	expression tag
Ser 1245	-	expression tag
Gly 1246	-	expression tag
Leu 1247	-	expression tag
Glu 1248	-	expression tag
Val 1249	-	expression tag
Leu 1250	-	expression tag
Phe 1251	-	expression tag
Gln 1252	-	expression tag
Gly 1253	-	expression tag
Pro 1254	-	expression tag
Gly 1255	-	expression tag
Gly 1256	-	expression tag
Trp 1257	-	expression tag
Ser 1258	-	expression tag
His 1259	-	expression tag
Pro 1260	-	expression tag
Gln 1261	-	expression tag
Phe 1262	-	expression tag
Glu 1263	-	expression tag
Lys 1264	-	expression tag
Gly 1265	-	expression tag
Gly 1266	-	expression tag
Gly 1267	-	expression tag
Ser 1268	-	expression tag
Gly 1269	-	expression tag
Gly 1270	-	expression tag
Gly 1271	-	expression tag
Ser 1272	-	expression tag
Gly 1273	-	expression tag
Gly 1274	-	expression tag
Ser 1275	-	expression tag
Ala 1276	-	expression tag
Trp 1277	-	expression tag
Ser 1278	-	expression tag
His 1279	-	expression tag
Pro 1280	-	expression tag
Gln 1281	-	expression tag
Phe 1282	-	expression tag
Glu 1283	-	expression tag
Lys 1284	-	expression tag
Gly 1285	-	expression tag
Gly 1286	-	expression tag
Ser 1287	-	expression tag
His 1288	-	expression tag
His 1289	-	expression tag
His 1290	-	expression tag
His 1291	-	expression tag
His 1292	-	expression tag
His 1293	-	expression tag
His 1294	-	expression tag
His 1295	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	2
	Total formula weight	185410.7
All*	Total formula weight	185410.7

*Water molecules are not included.