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8I0V

The cryo-EM structure of human post-Bact complex

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Pre-mRNA-processing-splicing factor 8polymer2335273974.31UniProt (Q6P2Q9)
Pfam (PF08082)
Pfam (PF08083)
Pfam (PF10598)
Pfam (PF10597)
Pfam (PF10596)
Pfam (PF12134)
Pfam (PF01398)
Pfam (PF08084)
Homo sapiens (human)PRP8 homolog,Splicing factor Prp8
2B
(B)
U5 snRNApolymer11737254.91GenBank (20330981)Homo sapiens (human)
3C
(C)
116 kDa U5 small nuclear ribonucleoprotein componentpolymer972109560.61UniProt (Q15029)
Pfam (PF16004)
Pfam (PF00009)
Pfam (PF03144)
Pfam (PF14492)
Pfam (PF03764)
Pfam (PF00679)
Homo sapiens (human)SNU114 homolog,hSNU114
4D
(E)
U5 small nuclear ribonucleoprotein 40 kDa proteinpolymer35739359.51UniProt (Q96DI7)
Pfam (PF00400)
Homo sapiens (human)U5-40K,U5 snRNP-specific 40 kDa protein
5E
(F)
U6 snRNApolymer10734404.41Homo sapiens
6F
(G)
Pre-mRNApolymer22070435.41Homo sapiens
7G
(H)
U2 snRNApolymer18860186.41GenBank (340097)Homo sapiens (human)
8H
(I)
Pre-mRNA-splicing factor SYF1polymer855100148.71UniProt (Q9HCS7)
Pfam (PF13181)
Homo sapiens (human)
9I
(J)
Crooked neck-like protein 1polymer848100610.01UniProt (Q9BZJ0)
Pfam (PF02184)
Homo sapiens (human)SYF3,Crooked neck homolog,hCrn
10J
(L)
Cell division cycle 5-like proteinpolymer80292406.91UniProt (Q99459)
Pfam (PF13921)
Pfam (PF11831)
Homo sapiens (human)Cdc5-like protein,Pombe cdc5-related protein
11K
(M)
Pre-mRNA-splicing factor SYF2polymer24328780.51UniProt (O95926)
Pfam (PF08231)
Homo sapiens (human)CCNDBP1-interactor,p29
12L
(N)
Protein BUD31 homologpolymer14417032.81UniProt (P41223)
Pfam (PF01125)
Homo sapiens (human)Protein G10 homolog
13M
(O)
Pre-mRNA-splicing factor RBM22polymer42046959.61UniProt (Q9NW64)
Pfam (PF21369)
Pfam (PF00076)
Homo sapiens (human)RNA-binding motif protein 22
14N
(P)
Spliceosome-associated protein CWC15 homologpolymer22926674.41UniProt (Q9P013)
Pfam (PF04889)
Homo sapiens (human)
15O
(Q)
RNA helicase aquariuspolymer1485171502.51UniProt (O60306)
Pfam (PF16399)
Pfam (PF21143)
Pfam (PF21144)
Pfam (PF13086)
Pfam (PF13087)
Homo sapiens (human)
16P
(R)
SNW domain-containing protein 1polymer53661770.61UniProt (Q13573)
Pfam (PF02731)
Homo sapiens (human)Nuclear protein SkiP,Nuclear receptor coactivator NCoA-62,Ski-interacting protein
17Q
(S)
Peptidyl-prolyl cis-trans isomerase-like 1polymer16618257.81UniProt (Q9Y3C6)
Pfam (PF00160)
Homo sapiens (human)PPIase,Rotamase PPIL1
18R
(T)
Pleiotropic regulator 1polymer51457280.81UniProt (O43660)
Pfam (PF00400)
Homo sapiens (human)
19S
(U)
Serine/arginine repetitive matrix protein 2polymer2752300255.31UniProt (Q9UQ35)
Pfam (PF08312)
Homo sapiens (human)Serine/arginine-rich splicing factor-related nuclear matrix protein of 300 kDa,Ser/Arg-related nuclear matrix protein of 300 kDa
20T
(V)
Pre-mRNA-splicing factor CWC22 homologpolymer908105646.61UniProt (Q9HCG8)
Pfam (PF02854)
Pfam (PF02847)
Homo sapiens (human)
21U
(W)
Pre-mRNA-processing factor 17polymer57965612.21UniProt (O60508)
Pfam (PF00400)
Homo sapiens (human)PRP17 homolog,hPRP17
22V
(X)
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16polymer1041119443.61UniProt (O60231)
Pfam (PF00270)
Pfam (PF00271)
Pfam (PF04408)
Pfam (PF21010)
Pfam (PF07717)
Homo sapiens (human)ATP-dependent RNA helicase #3,DEAH-box protein 16
23W
(Y)
Peptidyl-prolyl cis-trans isomerase-like 4polymer49257324.21UniProt (Q8WUA2)
Pfam (PF00160)
Pfam (PF00076)
Homo sapiens (human)PPIase,Cyclophilin-like protein PPIL4,Rotamase PPIL4
24X
(Z)
Pre-mRNA-splicing factor SPF27polymer22526163.41UniProt (O75934)
Pfam (PF05700)
Homo sapiens (human)Spliceosome-associated protein SPF 27
25UA, Y
(a, m)
Small nuclear ribonucleoprotein-associated proteins B and B'polymer24024642.12UniProt (P14678)
Pfam (PF01423)
Homo sapiens (human)SmB,snRNP-B,Sm protein B/B',SmB/B'
26YA, Z
(b, n)
Small nuclear ribonucleoprotein Sm D1polymer11913310.72UniProt (P62314)
Pfam (PF01423)
Homo sapiens (human)Sm-D1,Sm-D autoantigen,snRNP core protein D1
27AA, SA
(c, h)
Small nuclear ribonucleoprotein Sm D2polymer11813551.92UniProt (P62316)
Pfam (PF01423)
Homo sapiens (human)Sm-D2,snRNP core protein D2
28BA, TA
(d, i)
Small nuclear ribonucleoprotein Fpolymer869734.22UniProt (P62306)
Pfam (PF01423)
Homo sapiens (human)snRNP-F,Sm protein F,SmF
29CA, XA
(e, j)
Small nuclear ribonucleoprotein Epolymer9210817.62UniProt (P62304)
Pfam (PF01423)
Homo sapiens (human)snRNP-E,Sm protein E,SmE
30DA, WA
(f, k)
Small nuclear ribonucleoprotein Gpolymer768508.12UniProt (P62308)
Pfam (PF01423)
Homo sapiens (human)snRNP-G,Sm protein G,SmG
31EA, VA
(g, l)
Small nuclear ribonucleoprotein Sm D3polymer12613940.32UniProt (P62318)
Pfam (PF01423)
Homo sapiens (human)SmD3,Sm-D3,snRNP core protein D3
32FA, GA, HA, IA
(q, r, s, t)
Pre-mRNA-processing factor 19polymer50455245.54UniProt (Q9UMS4)
Pfam (PF04564)
Pfam (PF08606)
Pfam (PF00400)
Homo sapiens (human)PRP19/PSO4 homolog,hPso4,RING-type E3 ubiquitin transferase PRP19,Senescence evasion factor
33JA
(y)
Peptidyl-prolyl cis-trans isomerase Epolymer30133475.81UniProt (Q9UNP9)
Pfam (PF00076)
Pfam (PF00160)
Homo sapiens (human)PPIase E,Cyclophilin E,Rotamase E
34KA
(1)
Splicing factor 3B subunit 1polymer1304146024.91UniProt (O75533)
Pfam (PF08920)
Pfam (PF22646)
Homo sapiens (human)Pre-mRNA-splicing factor SF3b 155 kDa subunit,SF3b155
35LA
(3)
Splicing factor 3B subunit 3polymer1217135718.81UniProt (Q15393)
Pfam (PF10433)
Pfam (PF03178)
Homo sapiens (human)Pre-mRNA-splicing factor SF3b 130 kDa subunit,SF3b130
36MA
(2)
Splicing factor 3B subunit 2polymer895100377.81UniProt (Q13435)
Pfam (PF02037)
Pfam (PF04037)
Pfam (PF04046)
Homo sapiens (human)Pre-mRNA-splicing factor SF3b 145 kDa subunit,SF3b145
37NA
(4)
Splicing factor 3B subunit 4polymer42444436.61UniProt (Q15427)
Pfam (PF00076)
Homo sapiens (human)Pre-mRNA-splicing factor SF3b 49 kDa subunit
38OA
(7)
PHD finger-like domain-containing protein 5Apolymer11012427.51UniProt (Q7RTV0)
Pfam (PF03660)
Homo sapiens (human)PHD finger-like domain protein 5A
39PA
(5)
Splicing factor 3B subunit 5polymer8610149.41UniProt (Q9BWJ5)
Pfam (PF07189)
Homo sapiens (human)SF3b5
40QA
(p)
U2 small nuclear ribonucleoprotein B''polymer22525524.41UniProt (P08579)
Pfam (PF00076)
Homo sapiens (human)U2-B", U2 snRNP B''
41RA
(o)
U2 small nuclear ribonucleoprotein A'polymer25528456.61UniProt (P09661)
Pfam (PF14580)
Homo sapiens (human)U2-A', U2 snRNP A'
42ZA
(A)
INOSITOL HEXAKISPHOSPHATEnon-polymer660.01Chemie (IHP)
43AB
(C)
GUANOSINE-5'-TRIPHOSPHATEnon-polymer523.21Chemie (GTP)
44BB, CB, DB, EB, FB...
(C, F, L)
MAGNESIUM IONnon-polymer24.37Chemie (MG)
45IB, JB, KB, LB, MB...
(N, 7)
ZINC IONnon-polymer65.46Chemie (ZN)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains51
Total formula weight2967629.1
Non-Polymers*Number of molecules15
Total formula weight1745.8
All*Total formula weight2969374.9
*Water molecules are not included.

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PDB entries from 2025-07-16

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