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8I0U

The cryo-EM structure of human Bact-IV complex

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1APre-mRNA-processing-splicing factor 8polymer2335273974.31UniProt (Q6P2Q9)
In PDB
Homo sapiens (human)220 kDa U5 snRNP-specific protein,PRP8 homolog,Splicing factor Prp8,p220
2BU5 snRNApolymer11737254.91GenBank (20330981)Homo sapiens (human)
3C116 kDa U5 small nuclear ribonucleoprotein componentpolymer972109560.61UniProt (Q15029)
In PDB
Homo sapiens (human)SNU114,Elongation factor Tu GTP-binding domain-containing protein 2,SNU114 homolog,hSNU114,U5 snRNP-specific protein,116 kDa,U5-116 kDa
4EU5 small nuclear ribonucleoprotein 40 kDa proteinpolymer35739359.51UniProt (Q96DI7)
In PDB
Homo sapiens (human)SNR40,U5-40K,U5 snRNP-specific 40 kDa protein
5FU6 snRNApolymer10734404.41Homo sapiens (human)
6GPre-mRNApolymer22070435.41Homo sapiens (human)
7HU2 snRNApolymer18860186.41GenBank (340097)Homo sapiens (human)
8IPre-mRNA-splicing factor SYF1polymer855100148.71UniProt (Q9HCS7)
In PDB
Homo sapiens (human)Protein HCNP,XPA-binding protein 2
9JCrooked neck-like protein 1polymer848100610.01UniProt (Q9BZJ0)
In PDB
Homo sapiens (human)Crooked neck homolog,hCrn
10KRING finger protein 113Apolymer34338847.21UniProt (O15541)
In PDB
Homo sapiens (human)Zinc finger protein 183
11LCell division cycle 5-like proteinpolymer80292406.91UniProt (Q99459)
In PDB
Homo sapiens (human)Cdc5-like protein,Pombe cdc5-related protein
12MPre-mRNA-splicing factor SYF2polymer24328780.51UniProt (O95926)
In PDB
Homo sapiens (human)CCNDBP1-interactor,p29
13NProtein BUD31 homologpolymer14417032.81UniProt (P41223)
In PDB
Homo sapiens (human)Protein EDG-2,Protein G10 homolog
14OPre-mRNA-splicing factor RBM22polymer42046959.61UniProt (Q9NW64)
In PDB
Homo sapiens (human)RNA-binding motif protein 22,Zinc finger CCCH domain-containing protein 16
15PSpliceosome-associated protein CWC15 homologpolymer22926674.41UniProt (Q9P013)
In PDB
Homo sapiens (human)
16QRNA helicase aquariuspolymer1485171502.51UniProt (O60306)
In PDB
Homo sapiens (human)Intron-binding protein of 160 kDa,IBP160
17RSNW domain-containing protein 1polymer53661770.61UniProt (Q13573)
In PDB
Homo sapiens (human)Nuclear protein SkiP,Nuclear receptor coactivator NCoA-62,Ski-interacting protein
18SPeptidyl-prolyl cis-trans isomerase-like 1polymer16618257.81UniProt (Q9Y3C6)
In PDB
Homo sapiens (human)PPIase,Rotamase PPIL1
19TPleiotropic regulator 1polymer51457280.81UniProt (O43660)
In PDB
Homo sapiens (human)
20USerine/arginine repetitive matrix protein 2polymer2752300255.31UniProt (Q9UQ35)
In PDB
Homo sapiens (human)300 kDa nuclear matrix antigen,Serine/arginine-rich splicing factor-related nuclear matrix protein of 300 kDa,Ser/Arg-related nuclear matrix protein of 300 kDa,Splicing coactivator subunit SRm300,Tax-responsive enhancer element-binding protein 803,TaxREB803
21VPre-mRNA-splicing factor CWC22 homologpolymer908105646.61UniProt (Q9HCG8)
In PDB
Homo sapiens (human)Nucampholin homolog,fSAPb
22WPre-mRNA-processing factor 17polymer57965612.21UniProt (O60508)
In PDB
Homo sapiens (human)Cell division cycle 40 homolog,EH-binding protein 3,Ehb3,PRP17 homolog,hPRP17
23XPre-mRNA-splicing factor ATP-dependent RNA helicase DHX16polymer1041119443.61UniProt (O60231)
In PDB
Homo sapiens (human)ATP-dependent RNA helicase #3,DEAH-box protein 16
24YPeptidyl-prolyl cis-trans isomerase-like 4polymer49257324.21UniProt (Q8WUA2)
In PDB
Homo sapiens (human)PPIase,Cyclophilin-like protein PPIL4,Rotamase PPIL4
25ZPre-mRNA-splicing factor SPF27polymer22526163.41UniProt (O75934)
In PDB
Homo sapiens (human)Breast carcinoma-amplified sequence 2,DNA amplified in mammary carcinoma 1 protein,Spliceosome-associated protein SPF 27
26yPeptidyl-prolyl cis-trans isomerase Epolymer30133475.81UniProt (Q9UNP9)
In PDB
Homo sapiens (human)PPIase E,Cyclophilin E,Cyclophilin-33,Rotamase E
27a, mSmall nuclear ribonucleoprotein-associated proteins B and B'polymer24024642.12UniProt (P14678)
In PDB
Homo sapiens (human)snRNP-B,Sm protein B/B',SmB/B'
28b, nSmall nuclear ribonucleoprotein Sm D1polymer11913310.72UniProt (P62314)
In PDB
Homo sapiens (human)Sm-D1,Sm-D autoantigen,snRNP core protein D1
29c, hSmall nuclear ribonucleoprotein Sm D2polymer11813551.92UniProt (P62316)
In PDB
Homo sapiens (human)Sm-D2,snRNP core protein D2
30d, iSmall nuclear ribonucleoprotein Fpolymer869734.22UniProt (P62306)
In PDB
Homo sapiens (human)snRNP-F,Sm protein F,SmF
31e, jSmall nuclear ribonucleoprotein Epolymer9210817.62UniProt (P62304)
In PDB
Homo sapiens (human)snRNP-E,Sm protein E,SmE
32f, kSmall nuclear ribonucleoprotein Gpolymer768508.12UniProt (P62308)
In PDB
Homo sapiens (human)snRNP-G,Sm protein G,SmG
33g, lSmall nuclear ribonucleoprotein Sm D3polymer12613940.32UniProt (P62318)
In PDB
Homo sapiens (human)Sm-D3,snRNP core protein D3
34q, r, s, tPre-mRNA-processing factor 19polymer50455245.54UniProt (Q9UMS4)
In PDB
Homo sapiens (human)Nuclear matrix protein 200,PRP19/PSO4 homolog,hPso4,RING-type E3 ubiquitin transferase PRP19,Senescence evasion factor
351Splicing factor 3B subunit 1polymer1304146024.91UniProt (O75533)
In PDB
Homo sapiens (human)Pre-mRNA-splicing factor SF3b 155 kDa subunit,SF3b155,Spliceosome-associated protein 155,SAP 155
363Splicing factor 3B subunit 3polymer1217135718.81UniProt (Q15393)
In PDB
Homo sapiens (human)Pre-mRNA-splicing factor SF3b 130 kDa subunit,SF3b130,STAF130,Spliceosome-associated protein 130,SAP 130
37pU2 small nuclear ribonucleoprotein B''polymer22525524.41UniProt (P08579)
In PDB
Homo sapiens (human)U2 snRNP B''
38wSplicing factor 3A subunit 3polymer50158934.81UniProt (Q12874)
In PDB
Homo sapiens (human)SF3a60,Spliceosome-associated protein 61,SAP 61
392Splicing factor 3B subunit 2polymer895100377.81UniProt (Q13435)
In PDB
Homo sapiens (human)Pre-mRNA-splicing factor SF3b 145 kDa subunit,SF3b145,Spliceosome-associated protein 145,SAP 145
404Splicing factor 3B subunit 4polymer42444436.61UniProt (Q15427)
In PDB
Homo sapiens (human)Pre-mRNA-splicing factor SF3b 49 kDa subunit,Spliceosome-associated protein 49,SAP 49
417PHD finger-like domain-containing protein 5Apolymer11012427.51UniProt (Q7RTV0)
In PDB
Homo sapiens (human)PHD finger-like domain protein 5A,Splicing factor 3B-associated 14 kDa protein,SF3b14b
425Splicing factor 3B subunit 5polymer8610149.41UniProt (Q9BWJ5)
In PDB
Homo sapiens (human)SF3b5,Pre-mRNA-splicing factor SF3b 10 kDa subunit
43oU2 small nuclear ribonucleoprotein A'polymer25528456.61UniProt (P09661)
In PDB
Homo sapiens (human)U2 snRNP A'
44AINOSITOL HEXAKISPHOSPHATEnon-polymer660.01Chemie (IHP)
45CGUANOSINE-5'-TRIPHOSPHATEnon-polymer523.21Chemie (GTP)
46C, FMAGNESIUM IONnon-polymer24.37Chemie (MG)
47K, N, 7ZINC IONnon-polymer65.47Chemie (ZN)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains53
Total formula weight3065411.2
Non-Polymers*Number of molecules16
Total formula weight1811.2
All*Total formula weight3067222.4
*Water molecules are not included.

223166

PDB entries from 2024-07-31

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