8HXJ
BANAL-20-52 Spike trimer
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | Spike glycoprotein | polymer | 1286 | 142380.4 | 3 | UniProt (P0DTC2) Pfam (PF16451) Pfam (PF09408) Pfam (PF19209) Pfam (PF01601) | unclassified Coronavirinae | S glycoprotein,E2,Peplomer protein |
| 2 | AA, D, E, F, G... (a, D, E, F, G...) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 24 | In PDB GlyTouCan (G42666HT) | |||
| 3 | AB, BA, BB, CA, CB... (C, A, B) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 33 | Chemie (NAG) |
Sequence modifications
A, B, C: 1 - 1204 (UniProt: P0DTC2)
| PDB | External Database | Details |
|---|---|---|
| Ser 32 | Phe 32 | conflict |
| Leu 50 | Ser 50 | conflict |
| Ile 76 | Thr 76 | variant |
| Arg 147 | Lys 147 | conflict |
| Pro 218 | Gln 218 | conflict |
| Ser 292 | Ala 292 | conflict |
| Thr 346 | Arg 346 | conflict |
| Thr 372 | Ala 372 | conflict |
| Val 402 | Ile 402 | conflict |
| His 498 | Gln 498 | conflict |
| Asn 519 | His 519 | conflict |
| Ile 534 | Val 534 | conflict |
| Ala 604 | Thr 604 | conflict |
| Asn 627 | Asp 627 | conflict |
| - | Pro 681 | deletion |
| - | Arg 682 | deletion |
| - | Arg 683 | deletion |
| - | Ala 684 | deletion |
| Gln 789 | Pro 793 | conflict |
| Pro 982 | Lys 986 | conflict |
| Pro 983 | Val 987 | conflict |
| Ser 1163 | Gly 1167 | conflict |
| Leu 1205 | - | expression tag |
| Glu 1206 | - | expression tag |
| Gly 1207 | - | expression tag |
| Ser 1208 | - | expression tag |
| Gly 1209 | - | expression tag |
| Tyr 1210 | - | expression tag |
| Ile 1211 | - | expression tag |
| Pro 1212 | - | expression tag |
| Glu 1213 | - | expression tag |
| Ala 1214 | - | expression tag |
| Pro 1215 | - | expression tag |
| Arg 1216 | - | expression tag |
| Asp 1217 | - | expression tag |
| Gly 1218 | - | expression tag |
| Gln 1219 | - | expression tag |
| Ala 1220 | - | expression tag |
| Tyr 1221 | - | expression tag |
| Val 1222 | - | expression tag |
| Arg 1223 | - | expression tag |
| Lys 1224 | - | expression tag |
| Asp 1225 | - | expression tag |
| Gly 1226 | - | expression tag |
| Glu 1227 | - | expression tag |
| Trp 1228 | - | expression tag |
| Val 1229 | - | expression tag |
| Leu 1230 | - | expression tag |
| Leu 1231 | - | expression tag |
| Ser 1232 | - | expression tag |
| Thr 1233 | - | expression tag |
| Phe 1234 | - | expression tag |
| Leu 1235 | - | expression tag |
| Gly 1236 | - | expression tag |
| Arg 1237 | - | expression tag |
| Ser 1238 | - | expression tag |
| Leu 1239 | - | expression tag |
| Glu 1240 | - | expression tag |
| Val 1241 | - | expression tag |
| Leu 1242 | - | expression tag |
| Phe 1243 | - | expression tag |
| Gln 1244 | - | expression tag |
| Gly 1245 | - | expression tag |
| Pro 1246 | - | expression tag |
| Gly 1247 | - | expression tag |
| His 1248 | - | expression tag |
| His 1249 | - | expression tag |
| His 1250 | - | expression tag |
| His 1251 | - | expression tag |
| His 1252 | - | expression tag |
| His 1253 | - | expression tag |
| His 1254 | - | expression tag |
| His 1255 | - | expression tag |
| Ser 1256 | - | expression tag |
| Ala 1257 | - | expression tag |
| Trp 1258 | - | expression tag |
| Ser 1259 | - | expression tag |
| His 1260 | - | expression tag |
| Pro 1261 | - | expression tag |
| Gln 1262 | - | expression tag |
| Phe 1263 | - | expression tag |
| Glu 1264 | - | expression tag |
| Lys 1265 | - | expression tag |
| Gly 1266 | - | expression tag |
| Gly 1267 | - | expression tag |
| Gly 1268 | - | expression tag |
| Ser 1269 | - | expression tag |
| Gly 1270 | - | expression tag |
| Gly 1271 | - | expression tag |
| Gly 1272 | - | expression tag |
| Gly 1273 | - | expression tag |
| Ser 1274 | - | expression tag |
| Gly 1275 | - | expression tag |
| Gly 1276 | - | expression tag |
| Ser 1277 | - | expression tag |
| Ala 1278 | - | expression tag |
| Trp 1279 | - | expression tag |
| Ser 1280 | - | expression tag |
| His 1281 | - | expression tag |
| Pro 1282 | - | expression tag |
| Gln 1283 | - | expression tag |
| Phe 1284 | - | expression tag |
| Glu 1285 | - | expression tag |
| Lys 1286 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 427141.2 | |
| Branched | Number of molecules | 24 |
| Total formula weight | 10185.6 | |
| Non-Polymers* | Number of molecules | 33 |
| Total formula weight | 7299.9 | |
| All* | Total formula weight | 444626.7 |






