8HXJ
BANAL-20-52 Spike trimer
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C | Spike glycoprotein | polymer | 1286 | 142380.4 | 3 | UniProt (P0DTC2) Pfam (PF16451) Pfam (PF09408) Pfam (PF19209) Pfam (PF01601) In PDB | unclassified Coronavirinae | S glycoprotein,E2,Peplomer protein |
2 | a, D, E, F, G... | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 24 | In PDB GlyTouCan (G42666HT) | |||
3 | C, A, B | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 33 | Chemie (NAG) |
Sequence modifications
A, B, C: 1 - 1204 (UniProt: P0DTC2)
PDB | External Database | Details |
---|---|---|
Ser 32 | Phe 32 | conflict |
Leu 50 | Ser 50 | conflict |
Ile 76 | Thr 76 | variant |
Arg 147 | Lys 147 | conflict |
Pro 218 | Gln 218 | conflict |
Ser 292 | Ala 292 | conflict |
Thr 346 | Arg 346 | conflict |
Thr 372 | Ala 372 | conflict |
Val 402 | Ile 402 | conflict |
His 498 | Gln 498 | conflict |
Asn 519 | His 519 | conflict |
Ile 534 | Val 534 | conflict |
Ala 604 | Thr 604 | conflict |
Asn 627 | Asp 627 | conflict |
- | Pro 681 | deletion |
- | Arg 682 | deletion |
- | Arg 683 | deletion |
- | Ala 684 | deletion |
Gln 789 | Pro 793 | conflict |
Pro 982 | Lys 986 | conflict |
Pro 983 | Val 987 | conflict |
Ser 1163 | Gly 1167 | conflict |
Leu 1205 | - | expression tag |
Glu 1206 | - | expression tag |
Gly 1207 | - | expression tag |
Ser 1208 | - | expression tag |
Gly 1209 | - | expression tag |
Tyr 1210 | - | expression tag |
Ile 1211 | - | expression tag |
Pro 1212 | - | expression tag |
Glu 1213 | - | expression tag |
Ala 1214 | - | expression tag |
Pro 1215 | - | expression tag |
Arg 1216 | - | expression tag |
Asp 1217 | - | expression tag |
Gly 1218 | - | expression tag |
Gln 1219 | - | expression tag |
Ala 1220 | - | expression tag |
Tyr 1221 | - | expression tag |
Val 1222 | - | expression tag |
Arg 1223 | - | expression tag |
Lys 1224 | - | expression tag |
Asp 1225 | - | expression tag |
Gly 1226 | - | expression tag |
Glu 1227 | - | expression tag |
Trp 1228 | - | expression tag |
Val 1229 | - | expression tag |
Leu 1230 | - | expression tag |
Leu 1231 | - | expression tag |
Ser 1232 | - | expression tag |
Thr 1233 | - | expression tag |
Phe 1234 | - | expression tag |
Leu 1235 | - | expression tag |
Gly 1236 | - | expression tag |
Arg 1237 | - | expression tag |
Ser 1238 | - | expression tag |
Leu 1239 | - | expression tag |
Glu 1240 | - | expression tag |
Val 1241 | - | expression tag |
Leu 1242 | - | expression tag |
Phe 1243 | - | expression tag |
Gln 1244 | - | expression tag |
Gly 1245 | - | expression tag |
Pro 1246 | - | expression tag |
Gly 1247 | - | expression tag |
His 1248 | - | expression tag |
His 1249 | - | expression tag |
His 1250 | - | expression tag |
His 1251 | - | expression tag |
His 1252 | - | expression tag |
His 1253 | - | expression tag |
His 1254 | - | expression tag |
His 1255 | - | expression tag |
Ser 1256 | - | expression tag |
Ala 1257 | - | expression tag |
Trp 1258 | - | expression tag |
Ser 1259 | - | expression tag |
His 1260 | - | expression tag |
Pro 1261 | - | expression tag |
Gln 1262 | - | expression tag |
Phe 1263 | - | expression tag |
Glu 1264 | - | expression tag |
Lys 1265 | - | expression tag |
Gly 1266 | - | expression tag |
Gly 1267 | - | expression tag |
Gly 1268 | - | expression tag |
Ser 1269 | - | expression tag |
Gly 1270 | - | expression tag |
Gly 1271 | - | expression tag |
Gly 1272 | - | expression tag |
Gly 1273 | - | expression tag |
Ser 1274 | - | expression tag |
Gly 1275 | - | expression tag |
Gly 1276 | - | expression tag |
Ser 1277 | - | expression tag |
Ala 1278 | - | expression tag |
Trp 1279 | - | expression tag |
Ser 1280 | - | expression tag |
His 1281 | - | expression tag |
Pro 1282 | - | expression tag |
Gln 1283 | - | expression tag |
Phe 1284 | - | expression tag |
Glu 1285 | - | expression tag |
Lys 1286 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 427141.2 | |
Branched | Number of molecules | 24 |
Total formula weight | 10185.6 | |
Non-Polymers* | Number of molecules | 33 |
Total formula weight | 7299.9 | |
All* | Total formula weight | 444626.7 |