8HWT
SARS-CoV-2 Omicron BA.2 RBD complexed with BD-604 and S304 Fab
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Spike protein S2' | polymer | 223 | 25288.7 | 1 | UniProt (P0DTC2) Pfam (PF09408) | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV SARS-CoV-2) | |
| 2 | B (H) | BD-604 heavy chain | polymer | 229 | 24121.1 | 1 | Homo sapiens | ||
| 3 | C (L) | BD-604 light chain | polymer | 215 | 23391.9 | 1 | Homo sapiens | ||
| 4 | D (D) | S304 heavy chain | polymer | 231 | 24613.4 | 1 | Homo sapiens | ||
| 5 | E (E) | S304 light chain | polymer | 216 | 23458.0 | 1 | Homo sapiens |
Sequence modifications
A: 319 - 541 (UniProt: P0DTC2)
| PDB | External Database | Details |
|---|---|---|
| Asp 339 | Gly 339 | variant |
| Phe 371 | Ser 371 | variant |
| Pro 373 | Ser 373 | variant |
| Phe 375 | Ser 375 | variant |
| Ala 376 | Thr 376 | variant |
| Asn 405 | Asp 405 | variant |
| Ser 408 | Arg 408 | variant |
| Asn 417 | Lys 417 | variant |
| Lys 440 | Asn 440 | variant |
| Asn 477 | Ser 477 | variant |
| Lys 478 | Thr 478 | variant |
| Ala 484 | Glu 484 | variant |
| Arg 493 | Gln 493 | variant |
| Arg 498 | Gln 498 | variant |
| Tyr 501 | Asn 501 | variant |
| His 505 | Tyr 505 | variant |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 120873.1 | |
| All* | Total formula weight | 120873.1 |
