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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

8HU1

E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and ct6A37 in classical state

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A16S rRNApolymer1542499873.41Escherichia coli
2B30S ribosomal protein S2polymer24126781.71UniProt (P0A7V0)
Pfam (PF00318)
In PDB		Escherichia coliSmall ribosomal subunit protein uS2
3C30S ribosomal protein S3polymer23326031.31UniProt (P0A7V3)
Pfam (PF07650)
Pfam (PF00189)
In PDB		Escherichia coliSmall ribosomal subunit protein uS3
4D30S ribosomal protein S4polymer20623514.21UniProt (P0A7V8)
Pfam (PF01479)
Pfam (PF00163)
In PDB		Escherichia coliSmall ribosomal subunit protein uS4
5E30S ribosomal protein S5polymer16717629.41UniProt (P0A7W1)
Pfam (PF00333)
Pfam (PF03719)
In PDB		Escherichia coliSmall ribosomal subunit protein uS5
6F30S ribosomal protein S6, fully modified isoformpolymer13515727.51UniProt (P02358)
Pfam (PF01250)
In PDB		Escherichia coli
7G30S ribosomal protein S7polymer17920055.21UniProt (P02359)
Pfam (PF00177)
In PDB		Escherichia coliSmall ribosomal subunit protein uS7
8H30S ribosomal protein S8polymer13014146.61UniProt (P0A7W7)
Pfam (PF00410)
In PDB		Escherichia coliSmall ribosomal subunit protein uS8
9I30S ribosomal protein S9polymer13014886.31UniProt (P0A7X3)
Pfam (PF00380)
In PDB		Escherichia coliSmall ribosomal subunit protein uS9
10J30S ribosomal protein S10polymer10311755.61UniProt (P0A7R5)
Pfam (PF00338)
In PDB		Escherichia coliSmall ribosomal subunit protein uS10,Transcription termination/antitermination protein NusE
11K30S ribosomal protein S11polymer12913872.01UniProt (P0A7R9)
Pfam (PF00411)
In PDB		Escherichia coliSmall ribosomal subunit protein uS11
12L30S ribosomal protein S12polymer12413814.21UniProt (P0A7S3)
Pfam (PF00164)
In PDB		Escherichia coliSmall ribosomal subunit protein uS12
13M30S ribosomal protein S13polymer11813128.51UniProt (P0A7S9)
Pfam (PF00416)
In PDB		Escherichia coliSmall ribosomal subunit protein uS13
14N30S ribosomal protein S14polymer10111606.61UniProt (P0AG59)
Pfam (PF00253)
In PDB		Escherichia coliSmall ribosomal subunit protein uS14
15O30S ribosomal protein S15polymer8910290.81UniProt (P0ADZ4)
Pfam (PF00312)
In PDB		Escherichia coliSmall ribosomal subunit protein uS15
16P30S ribosomal protein S16polymer829207.61UniProt (P0A7T3)
Pfam (PF00886)
In PDB		Escherichia coliSmall ribosomal subunit protein bS16
17Q30S ribosomal protein S17polymer849724.51UniProt (P0AG63)
Pfam (PF00366)
In PDB		Escherichia coliSmall ribosomal subunit protein uS17
18R30S ribosomal protein S18polymer759005.51UniProt (P0A7T7)
Pfam (PF01084)
In PDB		Escherichia coliSmall ribosomal subunit protein bS18
19S30S ribosomal protein S19polymer9210455.41UniProt (P0A7U3)
Pfam (PF00203)
In PDB		Escherichia coliSmall ribosomal subunit protein uS19
20T30S ribosomal protein S20polymer879708.51UniProt (P0A7U7)
Pfam (PF01649)
In PDB		Escherichia coliSmall ribosomal subunit protein bS20
21U30S ribosomal protein S21polymer718524.01UniProt (P68679)
Pfam (PF01165)
In PDB		Escherichia coliSmall ribosomal subunit protein bS21
22a23S rRNApolymer2904941811.61Escherichia coli
23b5S rRNApolymer12038790.11Escherichia coli
24c50S ribosomal protein L2polymer27329923.61UniProt (P60422)
Pfam (PF00181)
Pfam (PF03947)
In PDB		Escherichia coliLarge ribosomal subunit protein uL2
25d50S ribosomal protein L3polymer20922291.61UniProt (P60438)
Pfam (PF00297)
In PDB		Escherichia coliLarge ribosomal subunit protein uL3
26e50S ribosomal protein L4polymer20122121.61UniProt (P60723)
Pfam (PF00573)
In PDB		Escherichia coliLarge ribosomal subunit protein uL4
27f50S ribosomal protein L5polymer17920333.61UniProt (P62399)
Pfam (PF00281)
Pfam (PF00673)
In PDB		Escherichia coliLarge ribosomal subunit protein uL5
28g50S ribosomal protein L6polymer17718932.81UniProt (P0AG55)
Pfam (PF00347)
In PDB		Escherichia coliLarge ribosomal subunit protein uL6
29h50S ribosomal protein L9polymer14915789.01UniProt (P0A7R1)
Pfam (PF01281)
Pfam (PF03948)
In PDB		Escherichia coliLarge ribosomal subunit protein bL9
30i50S ribosomal protein L13polymer14216050.61UniProt (P0AA10)
Pfam (PF00572)
In PDB		Escherichia coliLarge ribosomal subunit protein uL13
31j50S ribosomal protein L14polymer12313565.11UniProt (P0ADY3)
Pfam (PF00238)
In PDB		Escherichia coliLarge ribosomal subunit protein uL14
32k50S ribosomal protein L15polymer14415008.51UniProt (P02413)
Pfam (PF00828)
In PDB		Escherichia coliLarge ribosomal subunit protein uL15
33l50S ribosomal protein L16polymer13615329.31UniProt (P0ADY7)
Pfam (PF00252)
In PDB		Escherichia coliLarge ribosomal subunit protein uL16
34m50S ribosomal protein L17polymer12714393.71UniProt (P0AG44)
Pfam (PF01196)
In PDB		Escherichia coliLarge ribosomal subunit protein bL17
35n50S ribosomal protein L18polymer11712794.71UniProt (P0C018)
Pfam (PF00861)
In PDB		Escherichia coliLarge ribosomal subunit protein uL18
36o50S ribosomal protein L19polymer11513159.31UniProt (P0A7K6)
Pfam (PF01245)
In PDB		Escherichia coliLarge ribosomal subunit protein bL19
37p50S ribosomal protein L20polymer11813528.01UniProt (P0A7L3)
Pfam (PF00453)
In PDB		Escherichia coliLarge ribosomal subunit protein bL20
38q50S ribosomal protein L21polymer10311586.41UniProt (P0AG48)
Pfam (PF00829)
In PDB		Escherichia coliLarge ribosomal subunit protein bL21
39r50S ribosomal protein L22polymer11012253.41UniProt (P61175)
Pfam (PF00237)
In PDB		Escherichia coliLarge ribosomal subunit protein uL22
40s50S ribosomal protein L23polymer10011222.21UniProt (P0ADZ0)
Pfam (PF00276)
In PDB		Escherichia coliLarge ribosomal subunit protein uL23
41t50S ribosomal protein L24polymer10411339.31UniProt (P60624)
Pfam (PF00467)
Pfam (PF17136)
In PDB		Escherichia coliLarge ribosomal subunit protein uL24
42u50S ribosomal protein L25polymer9410713.51UniProt (P68919)
Pfam (PF01386)
In PDB		Escherichia coliLarge ribosomal subunit protein bL25
43v50S ribosomal protein L27polymer859146.51UniProt (P0A7L8)
Pfam (PF01016)
In PDB		Escherichia coliLarge ribosomal subunit protein bL27
44w50S ribosomal protein L28polymer789027.61UniProt (P0A7M2)
Pfam (PF00830)
In PDB		Escherichia coliLarge ribosomal subunit protein bL28
45x50S ribosomal protein L29polymer637286.51UniProt (P0A7M6)
Pfam (PF00831)
In PDB		Escherichia coliLarge ribosomal subunit protein uL29
46y50S ribosomal protein L30polymer596554.81UniProt (P0AG51)
Pfam (PF00327)
In PDB		Escherichia coliLarge ribosomal subunit protein uL30
47z50S ribosomal protein L32polymer576463.41UniProt (P0A7N4)
Pfam (PF01783)
In PDB		Escherichia coliLarge ribosomal subunit protein bL32
48050S ribosomal protein L33polymer556388.61UniProt (P0A7N9)
Pfam (PF00471)
In PDB		Escherichia coliLarge ribosomal subunit protein bL33
49150S ribosomal protein L34polymer465397.51UniProt (P0A7P5)
Pfam (PF00468)
In PDB		Escherichia coliLarge ribosomal subunit protein bL34
50250S ribosomal protein L35polymer657313.01UniProt (P0A7Q1)
Pfam (PF01632)
In PDB		Escherichia coliLarge ribosomal subunit protein bL35,Ribosomal protein A
51350S ribosomal protein L36polymer384377.41UniProt (P0A7Q6)
Pfam (PF00444)
In PDB		Escherichia coliLarge ribosomal subunit protein bL36-A,Ribosomal protein B
52450S ribosomal protein L31polymer707887.11UniProt (P0A7M9)
Pfam (PF01197)
In PDB		Escherichia coliLarge ribosomal subunit protein bL31-A
53VP-site tRNA_Glupolymer7624465.71Escherichia coli BW25113
54WmRNApolymer4815576.31Escherichia coli
55XA-site tRNA_Ile2polymer7624850.11Escherichia coli BW25113
56A, a, b, d, V...MAGNESIUM IONnon-polymer24.3314Chemie (MG)
57APOTASSIUM IONnon-polymer39.11Chemie (K)
Sequence modifications
K: 1 - 129 (UniProt: P0A7R9)
PDBExternal DatabaseDetails
Ias 119Asn 119modified residue
l: 1 - 136 (UniProt: P0ADY7)
PDBExternal DatabaseDetails
Ms6 82Met 82modified residue
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains55
Total formula weight2205410.6
Non-Polymers*Number of molecules315
Total formula weight7670.9
All*Total formula weight2213081.5
*Water molecules are not included.

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PDB entries from 2024-07-17

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