8HG5
Cryo-EM structure of the prasinophyte-specific light-harvesting complex (Lhcp)from Ostreococcus tauri
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (P, R) | Chlorophyll a-b binding protein, chloroplastic | polymer | 233 | 24689.8 | 2 | UniProt (Q3B9U7) Pfam (PF00504) | Ostreococcus tauri | |
| 2 | B (Q) | Chlorophyll a-b binding protein, chloroplastic | polymer | 226 | 24161.3 | 1 | UniProt (A0A090LYE8) Pfam (PF00504) | Ostreococcus tauri | |
| 3 | AA, BA, D, DB, E... (Q, P, R) | CHLOROPHYLL A | non-polymer | 893.5 | 24 | Chemie (CLA) | |||
| 4 | AB, BB, CA, DA, EA... (R, Q, P) | CHLOROPHYLL B | non-polymer | 907.5 | 15 | Chemie (CHL) | |||
| 5 | CB, FA, K (R, Q, P) | Chlorophyll c2 | non-polymer | 608.9 | 3 | Chemie (KC2) | |||
| 6 | JB, KB, NA, NB, OA... (R, Q, P) | (1~{S})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(1~{R},4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohex-2-en-1-yl]octadeca-3,5,7,9,11,13,15,17-octaenyl]cyclohex-3-en-1-ol | non-polymer | 570.9 | 12 | Chemie (Q6L) PubChem (101217149) PubChem (101217150) PubChem (155926598) PubChem (163106177) | |||
| 7 | LB, MA, T (R, Q, P) | (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL | non-polymer | 600.9 | 3 | Chemie (NEX) PubChem (177697037) PubChem (21158515) PubChem (52948899) PubChem (4481261) PubChem (5282217) PubChem (5320120) PubChem (159749) PubChem (10908146) PubChem (12358959) PubChem (5281247) PubChem (101052392) PubChem (101866355) PubChem (6384259) PubChem (101866356) PubChem (101866357) PubChem (102060371) PubChem (162910894) PubChem (162910891) PubChem (162910895) PubChem (139033583) PubChem (162910892) PubChem (162910893) PubChem (162910896) PubChem (169502056) PubChem (172012198) | |||
| 8 | MB, QA, TA, U, W... (R, Q, P) | (3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-1-[(1~{S},4~{S})-2,2-dimethyl-6-methylidene-1,4-bis(oxidanyl)cyclohexyl]-3,7,12,16-tetramethyl-18-[(1~{R},4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohex-2-en-1-yl]octadeca-3,5,7,9,11,13,15,17-octaen-2-one | non-polymer | 600.9 | 6 | Chemie (IWJ) PubChem (6442995) PubChem (90755942) PubChem (72747691) PubChem (15223585) PubChem (172839206) PubChem (163072984) |
Sequence modifications
Q: 29 - 253 (UniProt: A0A090LYE8)
| PDB | External Database | Details |
|---|---|---|
| Ace 28 | - | acetylation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 73540.9 | |
| Non-Polymers* | Number of molecules | 63 |
| Total formula weight | 49141.1 | |
| All* | Total formula weight | 122682.0 |
