8GZQ
Cryo-EM structure of the NS5-NS3-SLA complex
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Genome polyprotein | polymer | 908 | 104189.9 | 1 | UniProt (Q5I3C1) Pfam (PF01728) Pfam (PF00972) Pfam (PF20483) In PDB | Dengue virus | |
2 | B | Genome polyprotein | polymer | 673 | 74753.4 | 1 | UniProt (A0A6B7HXY7) Pfam (PF00949) Pfam (PF07652) Pfam (PF20907) UniProt (by SIFTS) (Q5I3C1) In PDB | Dengue virus | |
3 | S | RNA | polymer | 168 | 54128.9 | 1 | synthetic construct | ||
4 | A | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
5 | S | GUANOSINE-5'-DIPHOSPHATE | non-polymer | 443.2 | 1 | Chemie (GDP) |
Sequence modifications
A: 1 - 900 (UniProt: Q5I3C1)
B: 1 - 619 (UniProt: A0A6B7HXY7)
PDB | External Database | Details |
---|---|---|
Gly -7 | - | expression tag |
Pro -6 | - | expression tag |
Ser -5 | - | expression tag |
Ser -4 | - | expression tag |
Gly -3 | - | expression tag |
Ser -2 | - | expression tag |
Ser -1 | - | expression tag |
Gly 0 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Met -53 | - | initiating methionine |
Gly -52 | - | expression tag |
Ser -51 | - | expression tag |
Ser -50 | - | expression tag |
His -49 | - | expression tag |
His -48 | - | expression tag |
His -47 | - | expression tag |
His -46 | - | expression tag |
His -45 | - | expression tag |
His -44 | - | expression tag |
Ser -43 | - | expression tag |
Gln -42 | - | expression tag |
Asp -41 | - | expression tag |
Pro -40 | - | expression tag |
Glu -39 | - | expression tag |
Asn -38 | - | expression tag |
Leu -37 | - | expression tag |
Tyr -36 | - | expression tag |
Phe -35 | - | expression tag |
Gln -34 | - | expression tag |
Gly -33 | - | expression tag |
Ser -32 | - | expression tag |
Ser -31 | - | expression tag |
Gly -30 | - | expression tag |
Ser -29 | - | expression tag |
Ser -28 | - | expression tag |
Gly -27 | - | expression tag |
Ala -26 | - | expression tag |
Asp -25 | - | expression tag |
Leu -24 | - | expression tag |
Thr -23 | - | expression tag |
Val -22 | - | expression tag |
Glu -21 | - | expression tag |
Lys -20 | - | expression tag |
Ala -19 | - | expression tag |
Ala -18 | - | expression tag |
Asp -17 | - | expression tag |
Val -16 | - | expression tag |
Thr -15 | - | expression tag |
Trp -14 | - | expression tag |
Glu -13 | - | expression tag |
Glu -12 | - | expression tag |
Glu -11 | - | expression tag |
Ala -10 | - | expression tag |
Glu -9 | - | expression tag |
Gly -8 | - | expression tag |
Gly -7 | - | expression tag |
Gly -6 | - | expression tag |
Gly -5 | - | expression tag |
Ser -4 | - | expression tag |
Gly -3 | - | expression tag |
Gly -2 | - | expression tag |
Gly -1 | - | expression tag |
Gly 0 | - | expression tag |
Ala 135 | Ser 1608 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 233072.2 | |
Non-Polymers* | Number of molecules | 3 |
Total formula weight | 574.0 | |
All* | Total formula weight | 233646.2 |