8GPD
Crystal structure of NDM-1 at pH5.5 (Succinate) in complex with hydrolyzed penicillin V
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B | Metallo beta lactamase NDM-1 | polymer | 270 | 28527.4 | 2 | UniProt (E9NWK5) Pfam (PF00753) In PDB | Klebsiella pneumoniae | Metallo beta-lactamase,Metallo-beta-lactamase NDM1,Metallobetalactamase NDM-1,NDM-1,NDM1 metallo-beta-lactamase,New Delhi Metallo carbapenemase-1,New Delhi metallo-beta-lactamase NDM-1,New Delhi metallo-beta-lactamse 1 |
| 2 | A, B | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) | |||
| 3 | A, B | (2R,4S)-5,5-dimethyl-2-[(1R)-2-oxidanyl-2-oxidanylidene-1-(2-phenoxyethanoylamino)ethyl]-1,3-thiazolidine-4-carboxylic acid | non-polymer | 368.4 | 2 | Chemie (JXF) | |||
| 4 | B | POTASSIUM ION | non-polymer | 39.1 | 1 | Chemie (K) | |||
| 5 | water | water | 18.0 | 638 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 57054.9 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 1037.5 | |
| All* | Total formula weight | 58092.4 |
