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8GPC

Crystal structure of NDM-1 at pH5.5 (Succinate) in complex with hydrolyzed ampicillin

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, BMetallo beta lactamase NDM-1polymer27028527.42UniProt (E9NWK5)
Pfam (PF00753)
In PDB
Klebsiella pneumoniaeNew Delhi Metallo carbapenemase-1,New Delhi metallo-beta-lactamase NDM-1,New Delhi metallo-beta-lactamse 1
2A, BZINC IONnon-polymer65.44Chemie (ZN)
3A, B(2R,4S)-2-[(R)-{[(2R)-2-amino-2-phenylacetyl]amino}(carboxy)methyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acidnon-polymer367.42Chemie (ZZ7)
4ASODIUM IONnon-polymer23.01Chemie (NA)
5waterwater18.0599Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight57054.9
Non-Polymers*Number of molecules7
Total formula weight1019.5
All*Total formula weight58074.3
*Water molecules are not included.

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PDB entries from 2024-08-28

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