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8GOD

Co-crystal structure of Human Protein-arginine deiminase type-4 (PAD4) with small molecule inhibitor JBI-589

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Protein-arginine deiminase type-4polymer69177319.51UniProt (Q9UM07)
Pfam (PF08526)
Pfam (PF08527)
Pfam (PF03068)
Homo sapiens (human)HL-60 PAD,Peptidylarginine deiminase IV,Protein-arginine deiminase type IV
2B
(A)
[(3~{R})-3-azanylpiperidin-1-yl]-[2-[1-[(4-fluorophenyl)methyl]indol-2-yl]-3-methyl-imidazo[1,2-a]pyridin-7-yl]methanonenon-polymer481.61Chemie (K3X)
3C
(A)
waterwater18.04Chemie (HOH)
Sequence modifications
A: 1 - 663 (UniProt: Q9UM07)
PDBExternal DatabaseDetails
Met -27-initiating methionine
Gly -26-expression tag
Ser -25-expression tag
Ser -24-expression tag
His -23-expression tag
His -22-expression tag
His -21-expression tag
His -20-expression tag
His -19-expression tag
His -18-expression tag
Ser -17-expression tag
Ser -16-expression tag
Gly -15-expression tag
Leu -14-expression tag
Val -13-expression tag
Pro -12-expression tag
Arg -11-expression tag
Gly -10-expression tag
Ser -9-expression tag
His -8-expression tag
Met -7-expression tag
Glu -6-expression tag
Asn -5-expression tag
Leu -4-expression tag
Tyr -3-expression tag
Phe -2-expression tag
Gln -1-expression tag
Gly 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight77319.5
Non-Polymers*Number of molecules1
Total formula weight481.6
All*Total formula weight77801.1
*Water molecules are not included.

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PDB entries from 2025-12-24

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