8GLX
CryoEM structure of the TnsC(1-503)-TnsD(1-318)-DNA complex in a 6:2:1 stoichiometry from E. coli Tn7
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, E, F, G, I... (G, E, F, C, A...) | Transposon Tn7 transposition protein TnsC | polymer | 523 | 59318.9 | 6 | UniProt (P05846) Pfam (PF13401) | Escherichia coli | Protein E |
| 2 | B, H (X, Y) | Transposon Tn7 transposition protein TnsD | polymer | 318 | 36636.0 | 2 | UniProt (P13991) Pfam (PF06527) Pfam (PF15978) | Escherichia coli | |
| 3 | C (H) | DNA (50-MER) | polymer | 50 | 15438.9 | 1 | Escherichia coli | ||
| 4 | D (I) | DNA (50-MER) | polymer | 50 | 15366.8 | 1 | Escherichia coli | ||
| 5 | K, R (G, C) | ADENOSINE-5'-TRIPHOSPHATE | non-polymer | 507.2 | 2 | Chemie (ATP) | |||
| 6 | L, O, Q, S, V... (G, E, F, C, A...) | MAGNESIUM ION | non-polymer | 24.3 | 6 | Chemie (MG) | |||
| 7 | M, T (X, Y) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
| 8 | N, P, U, W (E, F, A, B) | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 4 | Chemie (ADP) |
Sequence modifications
G, E, F, C, A, B: 1 - 503 (UniProt: P05846)
| PDB | External Database | Details |
|---|---|---|
| Gly 2 | Ser 2 | engineered mutation |
| Pro 504 | - | expression tag |
| Asn 505 | - | expression tag |
| Ser 506 | - | expression tag |
| Ser 507 | - | expression tag |
| Ser 508 | - | expression tag |
| Val 509 | - | expression tag |
| Asp 510 | - | expression tag |
| Lys 511 | - | expression tag |
| Leu 512 | - | expression tag |
| Ala 513 | - | expression tag |
| Ala 514 | - | expression tag |
| Ala 515 | - | expression tag |
| Leu 516 | - | expression tag |
| Glu 517 | - | expression tag |
| His 518 | - | expression tag |
| His 519 | - | expression tag |
| His 520 | - | expression tag |
| His 521 | - | expression tag |
| His 522 | - | expression tag |
| His 523 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 10 |
| Total formula weight | 459991.3 | |
| Non-Polymers* | Number of molecules | 14 |
| Total formula weight | 2999.8 | |
| All* | Total formula weight | 462991.2 |






