8G6S
H2AK119ub-modified nucleosome ubiquitin position 2
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, E | Histone H3.2 | polymer | 136 | 15435.1 | 2 | UniProt (P84233) Pfam (PF00125) In PDB | Xenopus laevis (African clawed frog) | Histone H3 |
2 | B, F | Histone H4 | polymer | 103 | 11394.4 | 2 | UniProt (P62799) Pfam (PF15511) In PDB | Xenopus laevis (African clawed frog) | |
3 | C, G | Histone H2A | polymer | 130 | 14083.4 | 2 | UniProt (Q6AZJ8) Pfam (PF00125) Pfam (PF16211) UniProt (by SIFTS) (P06897) In PDB | Xenopus laevis (African clawed frog) | |
4 | D, H | Histone H2B 1.1 | polymer | 123 | 13655.9 | 2 | UniProt (P02281) Pfam (PF00125) In PDB | Xenopus laevis (African clawed frog) | H2B1.1 |
5 | I | 601 DNA (147-MER) | polymer | 147 | 45138.8 | 1 | synthetic construct | ||
6 | J | 601 DNA (147-MER) | polymer | 147 | 45610.0 | 1 | synthetic construct | ||
7 | K | Ubiquitin | polymer | 80 | 9036.4 | 1 | UniProt (P0CG47) Pfam (PF00240) In PDB | Homo sapiens (human) |
Sequence modifications
A, E: 0 - 135 (UniProt: P84233)
C, G: 0 - 129 (UniProt: Q6AZJ8)
D, H: 1 - 122 (UniProt: P02281)
K: 1 - 76 (UniProt: P0CG47)
PDB | External Database | Details |
---|---|---|
Ala 102 | Gly 103 | engineered mutation |
PDB | External Database | Details |
---|---|---|
Cys 119 | Lys 120 | engineered mutation |
PDB | External Database | Details |
---|---|---|
Met 0 | - | initiating methionine |
Thr 29 | Ser 33 | engineered mutation |
PDB | External Database | Details |
---|---|---|
Gly -3 | - | expression tag |
Ser -2 | - | expression tag |
His -1 | - | expression tag |
Met 0 | - | expression tag |
Cys 76 | Gly 76 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 11 |
Total formula weight | 208923.0 | |
All* | Total formula weight | 208923.0 |