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8G6Q

H2AK119ub-modified nucleosome ubiquitin position 1

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, EHistone H3.2polymer13615435.12UniProt (P84233)
Pfam (PF00125)
In PDB
Xenopus laevis (African clawed frog)Histone H3
2B, FHistone H4polymer10311394.42UniProt (P62799)
Pfam (PF15511)
In PDB
Xenopus laevis (African clawed frog)
3C, GHistone H2Apolymer13014083.42UniProt (Q6AZJ8)
Pfam (PF00125)
Pfam (PF16211)
UniProt (by SIFTS) (P06897)
In PDB
Xenopus laevis (African clawed frog)
4D, HHistone H2B 1.1polymer12313655.92UniProt (P02281)
Pfam (PF00125)
In PDB
Xenopus laevis (African clawed frog)H2B1.1
5I601 DNA (145-MER)polymer14544520.41synthetic construct
6J601 DNA (145-MER)polymer14544991.71synthetic construct
7KUbiquitinpolymer809036.41UniProt (P0CG47)
Pfam (PF00240)
In PDB
Homo sapiens (human)
Sequence modifications
A, E: 0 - 135 (UniProt: P84233)
PDBExternal DatabaseDetails
Ala 102Gly 103engineered mutation
C, G: 0 - 129 (UniProt: Q6AZJ8)
PDBExternal DatabaseDetails
Cys 119Lys 120engineered mutation
D, H: 1 - 122 (UniProt: P02281)
PDBExternal DatabaseDetails
Met 0-initiating methionine
Thr 29Ser 33engineered mutation
K: 1 - 76 (UniProt: P0CG47)
PDBExternal DatabaseDetails
Gly -3-expression tag
Ser -2-expression tag
His -1-expression tag
Met 0-expression tag
Cys 76Gly 76engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains11
Total formula weight207686.2
All*Total formula weight207686.2
*Water molecules are not included.

223166

PDB entries from 2024-07-31

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