8G3D
48-nm doublet microtubule from Tetrahymena thermophila strain K40R
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, KB, NA, P (0A, 1A, 2A, 3A) | RIB27A | polymer | 236 | 27605.6 | 4 | UniProt (I7LUL4) | Tetrahymena thermophila | |
| 2 | B (0B) | RIB38 | polymer | 329 | 38175.5 | 1 | UniProt (Q23JL9) | Tetrahymena thermophila | |
| 3 | C, R (0C, 1C) | CFAM166B | polymer | 156 | 17705.8 | 2 | UniProt (Q235M9) Pfam (PF10629) | Tetrahymena thermophila | |
| 4 | D, QA, S (0D, 1D, 2D) | CFAM166A | polymer | 225 | 25779.9 | 3 | UniProt (Q238X3) Pfam (PF10629) | Tetrahymena thermophila | |
| 5 | E, OB, RA, T (0E, 1E, 2E, 3E) | RIB22 | polymer | 191 | 22401.1 | 4 | UniProt (I7LT67) Pfam (PF13499) | Tetrahymena thermophila | |
| 6 | F (0F) | CFAM166C | polymer | 219 | 25069.3 | 1 | UniProt (Q22B75) | Tetrahymena thermophila | |
| 7 | G, V (0G, 1G) | CFAP107 | polymer | 183 | 21314.0 | 2 | UniProt (Q237T1) | Tetrahymena thermophila | |
| 8 | H, W (0H, 1H) | CFAP127 | polymer | 447 | 55558.0 | 2 | UniProt (I7LV70) Pfam (PF13868) | Tetrahymena thermophila | |
| 9 | CA, I, ZA (0N, 1N, 2N) | CFAP161A | polymer | 492 | 57489.6 | 3 | UniProt (Q22WJ6) Pfam (PF24569) | Tetrahymena thermophila | |
| 10 | CB, DC, FA, J, SC... (0Q, 1Q, 2Q, 3Q, 4Q...) | CFAP20 | polymer | 195 | 22976.5 | 7 | UniProt (Q22NU3) Pfam (PF05018) | Tetrahymena thermophila | Transcription factor iib protein, putative |
| 11 | EB, HA, K, VB (0S, 1S, 2S, 3S) | Parkin co-regulated protein PACRGA | polymer | 319 | 36304.8 | 4 | UniProt (I7MLV6) Pfam (PF10274) | Tetrahymena thermophila | |
| 12 | FB, IA, L, WB (0T, 1T, 2T, 3T) | IJ34 | polymer | 298 | 34434.1 | 4 | UniProt (I7M9T0) Pfam (PF14908) Pfam (PF18289) | Tetrahymena thermophila | |
| 13 | GB, JA, M, XB (0U, 1U, 2U, 3U) | Cilia- and flagella-associated protein 52 | polymer | 656 | 73429.1 | 4 | UniProt (Q22ZH2) Pfam (PF00400) | Tetrahymena thermophila | CFAP52A |
| 14 | HB, KA, N, YB (0V, 1V, 2V, 3V) | DNA polymerase delta C4-type zinc-finger protein | polymer | 269 | 31493.8 | 4 | UniProt (I7M279) Pfam (PF13864) | Tetrahymena thermophila | CFAP106A |
| 15 | GC, JB, MA, O, ZB (0X, 1X, 2X, 3X, 4X) | RIB43A protein | polymer | 142 | 17321.4 | 5 | UniProt (A4VDZ5) Pfam (PF05914) | Tetrahymena thermophila | RIB43A_S |
| 16 | LB, OA, Q (1B, 2B, 3B) | RIB57 | polymer | 498 | 57580.9 | 3 | UniProt (I7ME23) Pfam (PF13499) Pfam (PF13833) | Tetrahymena thermophila | |
| 17 | U (1F) | CFAP182A | polymer | 173 | 20109.8 | 1 | UniProt (Q24BV4) Pfam (PF14892) | Tetrahymena thermophila | |
| 18 | X (1I) | CFAP143 | polymer | 263 | 30485.7 | 1 | UniProt (A4VD56) | Tetrahymena thermophila | |
| 19 | Y (1J) | CFAP21A | polymer | 422 | 48501.4 | 1 | UniProt (I7MLS4) Pfam (PF25325) | Tetrahymena thermophila | |
| 20 | WA, Z (1K, 2K) | Cilia- and flagella-associated protein 53 | polymer | 489 | 60717.8 | 2 | UniProt (Q23YQ8) Pfam (PF13868) | Tetrahymena thermophila | CFAP53 |
| 21 | AA, RB, XA (1L, 2L, 3L) | CFAP115 | polymer | 940 | 110656.2 | 3 | UniProt (Q23KF9) | Tetrahymena thermophila | |
| 22 | BA, YA (1M, 2M) | Nucleoside diphosphate kinase | polymer | 372 | 42642.7 | 2 | UniProt (W7XGD1) Pfam (PF25364) Pfam (PF00334) | Tetrahymena thermophila | CFAP67A |
| 23 | AB, DA, SB (1O, 2O, 3O) | Cilia- and flagella-associated protein 45 | polymer | 494 | 59580.4 | 3 | UniProt (W7XCX2) Pfam (PF13868) | Tetrahymena thermophila | CFAP45 |
| 24 | BB, EA (1P, 2P) | CFAP210 | polymer | 507 | 61707.1 | 2 | UniProt (Q23EX8) Pfam (PF13868) | Tetrahymena thermophila | |
| 25 | DB, GA, UB (1R, 2R, 3R) | RIB72B | polymer | 516 | 60972.9 | 3 | UniProt (I7MCU1) Pfam (PF06565) | Tetrahymena thermophila | |
| 26 | IB, LA (1W, 2W) | Protofilament ribbon protein | polymer | 280 | 34224.4 | 2 | UniProt (Q240R7) Pfam (PF05914) | Tetrahymena thermophila | RIB43A_L |
| 27 | AC, MB, PA (2C, 3C, 4C) | RIB35 | polymer | 300 | 34952.7 | 3 | UniProt (I7ME81) Pfam (PF13499) | Tetrahymena thermophila | EF-hand pair protein |
| 28 | SA (2F) | CFAP182B | polymer | 96 | 11702.1 | 1 | UniProt (I7MLW3) Pfam (PF14892) | Tetrahymena thermophila | |
| 29 | TA (2G) | Flagellar FliJ protein | polymer | 99 | 12099.0 | 1 | UniProt (A4VCU8) Pfam (PF15104) | Tetrahymena thermophila | CFAP141 |
| 30 | CC, PB, UA (2H, 3H, 4H) | RIB27B | polymer | 229 | 26270.0 | 3 | UniProt (Q22CT6) | Tetrahymena thermophila | |
| 31 | QB, VA (2I, 3I) | STPG2 | polymer | 293 | 33647.1 | 2 | UniProt (I7M2G0) Pfam (PF07004) | Tetrahymena thermophila | Sperm-tail PG-rich repeat protein |
| 32 | NB (3D) | RIB26 | polymer | 237 | 26114.9 | 1 | UniProt (Q232I6) Pfam (PF01738) | Tetrahymena thermophila | |
| 33 | BC (4F) | CFAP129 | polymer | 276 | 31401.9 | 1 | UniProt (I7M9I4) | Tetrahymena thermophila | |
| 34 | AD, EC, TC, ZC (4R, 5R, 6R, 7R) | Flagellar microtugule protofilament ribbon protein | polymer | 613 | 72643.7 | 4 | UniProt (I7M0S7) Pfam (PF06565) | Tetrahymena thermophila | RIB72A |
| 35 | FC, UC (4S, 5S) | Parkin co-regulated protein PACRGB | polymer | 249 | 28413.2 | 2 | UniProt (I7M317) Pfam (PF10274) | Tetrahymena thermophila | |
| 36 | HC, IC, JC, KC (5A, 5B, 5C, 5D) | OJ2 | polymer | 175 | 19931.4 | 4 | UniProt (Q236L2) | Tetrahymena thermophila | |
| 37 | LC, MC, NC, OC (5E, 5F, 5G, 5H) | CFAP77A | polymer | 247 | 28989.6 | 4 | UniProt (Q22WR6) Pfam (PF14825) | Tetrahymena thermophila | |
| 38 | PC, QC, RC (5I, 5J, 5K) | OJ3 | polymer | 168 | 14315.6 | 3 | Tetrahymena thermophila | ||
| 39 | VC (6F) | SB1 | polymer | 145 | 17793.8 | 1 | UniProt (Q231B2) | Tetrahymena thermophila | |
| 40 | WC (6G) | STPG1A | polymer | 364 | 42132.3 | 1 | UniProt (Q24GM1) Pfam (PF07004) | Tetrahymena thermophila | Sperm-tail PG-rich repeat protein |
| 41 | XC (6H) | Nebulin | polymer | 518 | 61040.6 | 1 | UniProt (Q231B6) | Tetrahymena thermophila | |
| 42 | BD, CD (8L, 8N) | B5B6_fMIP | polymer | 507 | 43166.2 | 2 | Tetrahymena thermophila | ||
| 43 | DD (8P) | CFAP112A | polymer | 529 | 45038.6 | 1 | Tetrahymena thermophila | ||
| 44 | ED (8R) | B2B3_fMIP | polymer | 361 | 31099.1 | 1 | Tetrahymena thermophila | ||
| 45 | BE, BF, BG, BH, BI... (AA, AC, AE, AG, AI...) | Tubulin alpha chain | polymer | 449 | 49667.0 | 161 | UniProt (P41351) | Tetrahymena thermophila | Alpha-tubulin |
| 46 | AE, AF, AG, AH, AI... (AB, AD, AF, AH, AJ...) | Tubulin beta chain | polymer | 443 | 49617.7 | 161 | UniProt (P41352) | Tetrahymena thermophila | Beta-tubulin |
| 47 | ABA, AEA, AHA, AS, AV... (OC, RM, VI, DA, GK...) | GUANOSINE-5'-TRIPHOSPHATE | non-polymer | 523.2 | 161 | Chemie (GTP) PubChem (177679032) PubChem (135400627) PubChem (135487750) PubChem (136088935) PubChem (136803486) PubChem (135398633) PubChem (135544356) PubChem (135547949) PubChem (135600366) PubChem (135749822) PubChem (136005188) PubChem (136073923) PubChem (136240914) PubChem (136664747) PubChem (136772743) PubChem (136772744) PubChem (136803487) PubChem (137286749) PubChem (164715984) PubChem (171699466) | |||
| 48 | AAA, ADA, AGA, AR, AU... (MM, QI, UE, BK, FG...) | MAGNESIUM ION | non-polymer | 24.3 | 161 | Chemie (MG) PubChem (888) | |||
| 49 | ACA, AFA, AIA, AQ, AT... (PF, TB, WL, AH, ED...) | GUANOSINE-5'-DIPHOSPHATE | non-polymer | 443.2 | 161 | Chemie (GDP) PubChem (136073927) PubChem (135398619) PubChem (135402030) PubChem (135431654) PubChem (135566337) PubChem (135760556) PubChem (136026707) PubChem (136053418) PubChem (136663964) PubChem (136664748) PubChem (136759848) PubChem (136759849) PubChem (136759850) PubChem (136836636) PubChem (136847074) PubChem (172898537) |
Sequence modifications
6H: 1 - 518 (UniProt: Q231B6)
AA, AC, AE, AG, AI, AK, AM, BA, BC, BE, BG, BI, BK, BM, CA, CC, CE, CG, CI, CK, CM, DA, DC, DE, DG, DI, DK, DM, EA, EC, EE, EG, EI, EK, EM, FA, FC, FE, FG, FI, FK, FM, GA, GC, GE, GG, GI, GK, GM, HA, HC, HE, HG, HI, HK, HM, IA, IC, IE, IG, II, IK, IM, JA, JC, JE, JG, JI, JK, JM, KA, KC, KE, KG, KI, KK, KM, LA, LC, LE, LG, LI, LK, LM, MA, MC, ME, MG, MI, MK, MM, NA, NC, NE, NG, NI, NK, NM, OA, OC, OE, OG, OI, OK, OM, PA, PC, PE, PG, PI, PK, PM, QA, QC, QE, QG, QI, QK, QM, RA, RC, RE, RG, RI, RK, RM, SA, SC, SE, SG, SI, SK, SM, TA, TC, TE, TG, TI, TK, TM, UA, UC, UE, UG, UI, UK, UM, VA, VC, VE, VG, VI, VK, VM, WA, WC, WE, WG, WI, WK, WM: 1 - 449 (UniProt: P41351)
| PDB | External Database | Details |
|---|---|---|
| His 198 | Met 198 | conflict |
| Met 199 | Gln 199 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Arg 40 | Lys 40 | variant |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 431 |
| Total formula weight | 20202968.0 | |
| Non-Polymers* | Number of molecules | 483 |
| Total formula weight | 159500.4 | |
| All* | Total formula weight | 20362468.5 |
