8G3D
48-nm doublet microtubule from Tetrahymena thermophila strain K40R
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, KB, NA, P (0A, 1A, 2A, 3A) | RIB27A | polymer | 236 | 27605.6 | 4 | UniProt (I7LUL4) | Tetrahymena thermophila | |
| 2 | B (0B) | RIB38 | polymer | 329 | 38175.5 | 1 | UniProt (Q23JL9) | Tetrahymena thermophila | |
| 3 | C, R (0C, 1C) | CFAM166B | polymer | 156 | 17705.8 | 2 | UniProt (Q235M9) Pfam (PF10629) | Tetrahymena thermophila | |
| 4 | D, QA, S (0D, 1D, 2D) | CFAM166A | polymer | 225 | 25779.9 | 3 | UniProt (Q238X3) Pfam (PF10629) | Tetrahymena thermophila | |
| 5 | E, OB, RA, T (0E, 1E, 2E, 3E) | RIB22 | polymer | 191 | 22401.1 | 4 | UniProt (I7LT67) Pfam (PF13499) | Tetrahymena thermophila | |
| 6 | F (0F) | CFAM166C | polymer | 219 | 25069.3 | 1 | UniProt (Q22B75) | Tetrahymena thermophila | |
| 7 | G, V (0G, 1G) | CFAP107 | polymer | 183 | 21314.0 | 2 | UniProt (Q237T1) | Tetrahymena thermophila | |
| 8 | H, W (0H, 1H) | CFAP127 | polymer | 447 | 55558.0 | 2 | UniProt (I7LV70) Pfam (PF13868) | Tetrahymena thermophila | |
| 9 | CA, I, ZA (0N, 1N, 2N) | CFAP161A | polymer | 492 | 57489.6 | 3 | UniProt (Q22WJ6) | Tetrahymena thermophila | |
| 10 | CB, DC, FA, J, SC... (0Q, 1Q, 2Q, 3Q, 4Q...) | CFAP20 | polymer | 195 | 22976.5 | 7 | UniProt (Q22NU3) Pfam (PF05018) | Tetrahymena thermophila | Transcription factor iib protein, putative |
| 11 | EB, HA, K, VB (0S, 1S, 2S, 3S) | Parkin co-regulated protein PACRGA | polymer | 319 | 36304.8 | 4 | UniProt (I7MLV6) Pfam (PF10274) | Tetrahymena thermophila | |
| 12 | FB, IA, L, WB (0T, 1T, 2T, 3T) | IJ34 | polymer | 298 | 34434.1 | 4 | UniProt (I7M9T0) Pfam (PF14908) Pfam (PF18289) | Tetrahymena thermophila | |
| 13 | GB, JA, M, XB (0U, 1U, 2U, 3U) | Cilia- and flagella-associated protein 52 | polymer | 656 | 73429.1 | 4 | UniProt (Q22ZH2) Pfam (PF00400) | Tetrahymena thermophila | CFAP52A |
| 14 | HB, KA, N, YB (0V, 1V, 2V, 3V) | DNA polymerase delta C4-type zinc-finger protein | polymer | 269 | 31493.8 | 4 | UniProt (I7M279) Pfam (PF13864) | Tetrahymena thermophila | CFAP106A |
| 15 | GC, JB, MA, O, ZB (0X, 1X, 2X, 3X, 4X) | RIB43A protein | polymer | 142 | 17321.4 | 5 | UniProt (A4VDZ5) Pfam (PF05914) | Tetrahymena thermophila | RIB43A_S |
| 16 | LB, OA, Q (1B, 2B, 3B) | RIB57 | polymer | 498 | 57580.9 | 3 | UniProt (I7ME23) Pfam (PF13499) Pfam (PF13833) | Tetrahymena thermophila | |
| 17 | U (1F) | CFAP182A | polymer | 173 | 20109.8 | 1 | UniProt (Q24BV4) Pfam (PF14892) | Tetrahymena thermophila | |
| 18 | X (1I) | CFAP143 | polymer | 263 | 30485.7 | 1 | UniProt (A4VD56) | Tetrahymena thermophila | |
| 19 | Y (1J) | CFAP21A | polymer | 422 | 48501.4 | 1 | UniProt (I7MLS4) | Tetrahymena thermophila | |
| 20 | WA, Z (1K, 2K) | Cilia- and flagella-associated protein 53 | polymer | 489 | 60717.8 | 2 | UniProt (Q23YQ8) Pfam (PF13868) | Tetrahymena thermophila | CFAP53 |
| 21 | AA, RB, XA (1L, 2L, 3L) | CFAP115 | polymer | 940 | 110656.2 | 3 | UniProt (Q23KF9) | Tetrahymena thermophila | |
| 22 | BA, YA (1M, 2M) | Nucleoside diphosphate kinase | polymer | 372 | 42642.7 | 2 | UniProt (W7XGD1) Pfam (PF00334) | Tetrahymena thermophila | CFAP67A |
| 23 | AB, DA, SB (1O, 2O, 3O) | Cilia- and flagella-associated protein 45 | polymer | 494 | 59580.4 | 3 | UniProt (W7XCX2) Pfam (PF13868) | Tetrahymena thermophila | CFAP45 |
| 24 | BB, EA (1P, 2P) | CFAP210 | polymer | 507 | 61707.1 | 2 | UniProt (Q23EX8) Pfam (PF13868) | Tetrahymena thermophila | |
| 25 | DB, GA, UB (1R, 2R, 3R) | RIB72B | polymer | 516 | 60972.9 | 3 | UniProt (I7MCU1) Pfam (PF06565) | Tetrahymena thermophila | |
| 26 | IB, LA (1W, 2W) | Protofilament ribbon protein | polymer | 280 | 34224.4 | 2 | UniProt (Q240R7) Pfam (PF05914) | Tetrahymena thermophila | RIB43A_L |
| 27 | AC, MB, PA (2C, 3C, 4C) | RIB35 | polymer | 300 | 34952.7 | 3 | UniProt (I7ME81) Pfam (PF13499) | Tetrahymena thermophila | EF-hand pair protein |
| 28 | SA (2F) | CFAP182B | polymer | 96 | 11702.1 | 1 | UniProt (I7MLW3) Pfam (PF14892) | Tetrahymena thermophila | |
| 29 | TA (2G) | Flagellar FliJ protein | polymer | 99 | 12099.0 | 1 | UniProt (A4VCU8) Pfam (PF15104) | Tetrahymena thermophila | CFAP141 |
| 30 | CC, PB, UA (2H, 3H, 4H) | RIB27B | polymer | 229 | 26270.0 | 3 | UniProt (Q22CT6) | Tetrahymena thermophila | |
| 31 | QB, VA (2I, 3I) | STPG2 | polymer | 293 | 33647.1 | 2 | UniProt (I7M2G0) Pfam (PF07004) | Tetrahymena thermophila | Sperm-tail PG-rich repeat protein |
| 32 | NB (3D) | RIB26 | polymer | 237 | 26114.9 | 1 | UniProt (Q232I6) Pfam (PF01738) | Tetrahymena thermophila | |
| 33 | BC (4F) | CFAP129 | polymer | 276 | 31401.9 | 1 | UniProt (I7M9I4) | Tetrahymena thermophila | |
| 34 | AD, EC, TC, ZC (4R, 5R, 6R, 7R) | Flagellar microtugule protofilament ribbon protein | polymer | 613 | 72643.7 | 4 | UniProt (I7M0S7) Pfam (PF06565) | Tetrahymena thermophila | RIB72A |
| 35 | FC, UC (4S, 5S) | Parkin co-regulated protein PACRGB | polymer | 249 | 28413.2 | 2 | UniProt (I7M317) Pfam (PF10274) | Tetrahymena thermophila | |
| 36 | HC, IC, JC, KC (5A, 5B, 5C, 5D) | OJ2 | polymer | 175 | 19931.4 | 4 | UniProt (Q236L2) | Tetrahymena thermophila | |
| 37 | LC, MC, NC, OC (5E, 5F, 5G, 5H) | CFAP77A | polymer | 247 | 28989.6 | 4 | UniProt (Q22WR6) Pfam (PF14825) | Tetrahymena thermophila | |
| 38 | PC, QC, RC (5I, 5J, 5K) | OJ3 | polymer | 168 | 14315.6 | 3 | Tetrahymena thermophila | ||
| 39 | VC (6F) | SB1 | polymer | 145 | 17793.8 | 1 | UniProt (Q231B2) | Tetrahymena thermophila | |
| 40 | WC (6G) | STPG1A | polymer | 364 | 42132.3 | 1 | UniProt (Q24GM1) Pfam (PF07004) | Tetrahymena thermophila | Sperm-tail PG-rich repeat protein |
| 41 | XC (6H) | Nebulin | polymer | 518 | 61040.6 | 1 | UniProt (Q231B6) | Tetrahymena thermophila | |
| 42 | BD, CD (8L, 8N) | B5B6_fMIP | polymer | 507 | 43166.2 | 2 | Tetrahymena thermophila | ||
| 43 | DD (8P) | CFAP112A | polymer | 529 | 45038.6 | 1 | Tetrahymena thermophila | ||
| 44 | ED (8R) | B2B3_fMIP | polymer | 361 | 31099.1 | 1 | Tetrahymena thermophila | ||
| 45 | BE, BF, BG, BH, BI... (AA, AC, AE, AG, AI...) | Tubulin alpha chain | polymer | 449 | 49667.0 | 161 | UniProt (P41351) Pfam (PF00091) Pfam (PF03953) | Tetrahymena thermophila | Alpha-tubulin |
| 46 | AE, AF, AG, AH, AI... (AB, AD, AF, AH, AJ...) | Tubulin beta chain | polymer | 443 | 49617.7 | 161 | UniProt (P41352) Pfam (PF00091) Pfam (PF03953) | Tetrahymena thermophila | Beta-tubulin |
| 47 | ABA, AEA, AHA, AS, AV... (OC, RM, VI, DA, GK...) | GUANOSINE-5'-TRIPHOSPHATE | non-polymer | 523.2 | 161 | Chemie (GTP) | |||
| 48 | AAA, ADA, AGA, AR, AU... (MM, QI, UE, BK, FG...) | MAGNESIUM ION | non-polymer | 24.3 | 161 | Chemie (MG) | |||
| 49 | ACA, AFA, AIA, AQ, AT... (PF, TB, WL, AH, ED...) | GUANOSINE-5'-DIPHOSPHATE | non-polymer | 443.2 | 161 | Chemie (GDP) |
Sequence modifications
6H: 1 - 518 (UniProt: Q231B6)
AA, AC, AE, AG, AI, AK, AM, BA, BC, BE, BG, BI, BK, BM, CA, CC, CE, CG, CI, CK, CM, DA, DC, DE, DG, DI, DK, DM, EA, EC, EE, EG, EI, EK, EM, FA, FC, FE, FG, FI, FK, FM, GA, GC, GE, GG, GI, GK, GM, HA, HC, HE, HG, HI, HK, HM, IA, IC, IE, IG, II, IK, IM, JA, JC, JE, JG, JI, JK, JM, KA, KC, KE, KG, KI, KK, KM, LA, LC, LE, LG, LI, LK, LM, MA, MC, ME, MG, MI, MK, MM, NA, NC, NE, NG, NI, NK, NM, OA, OC, OE, OG, OI, OK, OM, PA, PC, PE, PG, PI, PK, PM, QA, QC, QE, QG, QI, QK, QM, RA, RC, RE, RG, RI, RK, RM, SA, SC, SE, SG, SI, SK, SM, TA, TC, TE, TG, TI, TK, TM, UA, UC, UE, UG, UI, UK, UM, VA, VC, VE, VG, VI, VK, VM, WA, WC, WE, WG, WI, WK, WM: 1 - 449 (UniProt: P41351)
| PDB | External Database | Details |
|---|---|---|
| His 198 | Met 198 | conflict |
| Met 199 | Gln 199 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Arg 40 | Lys 40 | variant |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 431 |
| Total formula weight | 20202968.0 | |
| Non-Polymers* | Number of molecules | 483 |
| Total formula weight | 159500.4 | |
| All* | Total formula weight | 20362468.5 |
