8FMW
The structure of a hibernating ribosome in the Lyme disease pathogen
This is a non-PDB format compatible entry.
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | 16S ribosomal RNA | polymer | 1529 | 495137.3 | 1 | GenBank (AE000783) | Borreliella burgdorferi B31 | |
2 | C | 30S ribosomal protein S3 | polymer | 206 | 23361.7 | 1 | UniProt (P94273) Pfam (PF07650) Pfam (PF00189) In PDB | Borreliella burgdorferi B31 | |
3 | D | 30S ribosomal protein S4 | polymer | 208 | 24003.1 | 1 | UniProt (O51560) Pfam (PF00163) Pfam (PF01479) In PDB | Borreliella burgdorferi B31 | |
4 | E | 30S ribosomal protein S5 | polymer | 158 | 17030.1 | 1 | UniProt (O51448) Pfam (PF00333) Pfam (PF03719) In PDB | Borreliella burgdorferi B31 | |
5 | F | 30S ribosomal protein S6 | polymer | 97 | 11595.6 | 1 | UniProt (O51142) Pfam (PF01250) In PDB | Borreliella burgdorferi B31 | |
6 | G | 30S ribosomal protein S7 | polymer | 157 | 18289.3 | 1 | UniProt (O51347) Pfam (PF00177) In PDB | Borreliella burgdorferi B31 | |
7 | H | 30S ribosomal protein S8 | polymer | 132 | 14838.5 | 1 | UniProt (O51445) Pfam (PF00410) In PDB | Borreliella burgdorferi B31 | |
8 | I | 30S ribosomal protein S9 | polymer | 131 | 14855.1 | 1 | UniProt (O51313) Pfam (PF00380) In PDB | Borreliella burgdorferi B31 | |
9 | J | 30S ribosomal protein S10 | polymer | 102 | 11657.9 | 1 | UniProt (P94266) Pfam (PF00338) In PDB | Borreliella burgdorferi B31 | |
10 | K | 30S ribosomal protein S11 | polymer | 117 | 12480.4 | 1 | UniProt (O51454) Pfam (PF00411) In PDB | Borreliella burgdorferi B31 | |
11 | L | 30S ribosomal protein S12 | polymer | 124 | 13823.3 | 1 | UniProt (O51348) Pfam (PF00164) In PDB | Borreliella burgdorferi B31 | |
12 | M | 30S ribosomal protein S13 | polymer | 114 | 12936.2 | 1 | UniProt (O51453) Pfam (PF00416) In PDB | Borreliella burgdorferi B31 | |
13 | N | 30S ribosomal protein S14 type Z | polymer | 60 | 7088.6 | 1 | UniProt (O51444) Pfam (PF00253) In PDB | Borreliella burgdorferi B31 | |
14 | O | 30S ribosomal protein S15 | polymer | 88 | 10241.2 | 1 | UniProt (O51744) Pfam (PF00312) In PDB | Borreliella burgdorferi B31 | |
15 | P | 30S ribosomal protein S16 | polymer | 83 | 9700.5 | 1 | UniProt (O51638) Pfam (PF00886) In PDB | Borreliella burgdorferi B31 | |
16 | Q | 30S ribosomal protein S17 | polymer | 82 | 9675.7 | 1 | UniProt (O51440) Pfam (PF00366) In PDB | Borreliella burgdorferi B31 | |
17 | R | 30S ribosomal protein S18 | polymer | 63 | 7417.9 | 1 | UniProt (O51140) Pfam (PF01084) In PDB | Borreliella burgdorferi B31 | |
18 | S | 30S ribosomal protein S19 | polymer | 84 | 9495.1 | 1 | UniProt (P94271) Pfam (PF00203) In PDB | Borreliella burgdorferi B31 | |
19 | T | 30S ribosomal protein S20 | polymer | 85 | 9977.2 | 1 | UniProt (P49394) Pfam (PF01649) In PDB | Borreliella burgdorferi B31 | |
20 | U | 30S ribosomal protein S21 | polymer | 69 | 8605.4 | 1 | UniProt (O51271) Pfam (PF01165) In PDB | Borreliella burgdorferi B31 | |
21 | V | 30S ribosomal protein bS22 | polymer | 28 | 3575.6 | 1 | Borreliella burgdorferi B31 | ||
22 | W | Ribosomal subunit interface protein | polymer | 97 | 11617.6 | 1 | UniProt (O51405) Pfam (PF02482) In PDB | Borreliella burgdorferi B31 | |
23 | X | E-site t-RNA | polymer | 76 | 24417.5 | 1 | GenBank (AE000783.1) | Borreliella burgdorferi B31 | |
24 | AA | 23S ribosomal RNA | polymer | 2929 | 948648.2 | 1 | GenBank (AE000783) | Borreliella burgdorferi B31 | |
25 | AB | 5S ribosomal RNA | polymer | 112 | 36188.5 | 1 | GenBank (AE000783) | Borreliella burgdorferi B31 | |
26 | AC | 50S ribosomal protein L1 | polymer | 221 | 25177.1 | 1 | UniProt (O51353) Pfam (PF00687) In PDB | Borreliella burgdorferi B31 | |
27 | AD | 50S ribosomal protein L2 | polymer | 277 | 30655.6 | 1 | UniProt (P94270) Pfam (PF00181) Pfam (PF03947) In PDB | Borreliella burgdorferi B31 | |
28 | AE | 50S ribosomal protein L3 | polymer | 206 | 22266.0 | 1 | UniProt (P94267) Pfam (PF00297) In PDB | Borreliella burgdorferi B31 | |
29 | AF | 50S ribosomal protein L4 | polymer | 209 | 23535.4 | 1 | UniProt (P94268) Pfam (PF00573) In PDB | Borreliella burgdorferi B31 | |
30 | AG | 50S ribosomal protein L5 | polymer | 182 | 20445.9 | 1 | UniProt (O51443) Pfam (PF00281) Pfam (PF00673) In PDB | Borreliella burgdorferi B31 | |
31 | AH | 50S ribosomal protein L6 | polymer | 180 | 19972.3 | 1 | UniProt (O51446) Pfam (PF00347) In PDB | Borreliella burgdorferi B31 | |
32 | AI | 50S ribosomal protein L9 | polymer | 148 | 17122.0 | 1 | UniProt (O51139) Pfam (PF01281) Pfam (PF03948) In PDB | Borreliella burgdorferi B31 | |
33 | AJ | 50S ribosomal protein L10 | polymer | 162 | 18086.4 | 1 | UniProt (O51352) Pfam (PF00466) In PDB | Borreliella burgdorferi B31 | |
34 | AK | 50S ribosomal protein L11 | polymer | 139 | 14731.3 | 1 | UniProt (O51354) Pfam (PF03946) Pfam (PF00298) In PDB | Borreliella burgdorferi B31 | |
35 | AL | 50S ribosomal protein L13 | polymer | 145 | 16594.5 | 1 | UniProt (O51314) Pfam (PF00572) In PDB | Borreliella burgdorferi B31 | |
36 | AM | 50S ribosomal protein L14 | polymer | 122 | 13465.8 | 1 | UniProt (O51441) Pfam (PF00238) In PDB | Borreliella burgdorferi B31 | |
37 | AN | 50S ribosomal protein L15 | polymer | 145 | 16073.0 | 1 | UniProt (O51450) Pfam (PF00828) In PDB | Borreliella burgdorferi B31 | |
38 | AO | 50S ribosomal protein L16 | polymer | 138 | 15598.5 | 1 | UniProt (O51438) Pfam (PF00252) In PDB | Borreliella burgdorferi B31 | |
39 | AP | 50S ribosomal protein L17 | polymer | 121 | 14308.1 | 1 | UniProt (O51456) Pfam (PF01196) In PDB | Borreliella burgdorferi B31 | |
40 | AQ | 50S ribosomal protein L18 | polymer | 119 | 13753.1 | 1 | UniProt (O51447) Pfam (PF00861) In PDB | Borreliella burgdorferi B31 | |
41 | AR | 50S ribosomal protein L19 | polymer | 117 | 13544.1 | 1 | UniProt (O51642) Pfam (PF01245) In PDB | Borreliella burgdorferi B31 | |
42 | AS | 50S ribosomal protein L20 | polymer | 114 | 13416.0 | 1 | UniProt (O51206) Pfam (PF00453) In PDB | Borreliella burgdorferi B31 | |
43 | AT | 50S ribosomal protein L21 | polymer | 103 | 12204.2 | 1 | UniProt (O51719) Pfam (PF00829) In PDB | Borreliella burgdorferi B31 | |
44 | AU | 50S ribosomal protein L22 | polymer | 115 | 13150.5 | 1 | UniProt (P94272) Pfam (PF00237) In PDB | Borreliella burgdorferi B31 | |
45 | AV | 50S ribosomal protein L23 | polymer | 98 | 11164.2 | 1 | UniProt (P94269) Pfam (PF00276) In PDB | Borreliella burgdorferi B31 | |
46 | AW | 50S ribosomal protein L24 | polymer | 101 | 11467.8 | 1 | UniProt (O51442) Pfam (PF00467) Pfam (PF17136) In PDB | Borreliella burgdorferi B31 | |
47 | AX | 50S ribosomal protein L25 | polymer | 181 | 20347.4 | 1 | UniProt (O51727) Pfam (PF01386) Pfam (PF14693) In PDB | Borreliella burgdorferi B31 | General stress protein CTC |
48 | AY | 50S ribosomal protein L27 | polymer | 74 | 8104.5 | 1 | UniProt (O51721) Pfam (PF01016) In PDB | Borreliella burgdorferi B31 | |
49 | AZ | 50S ribosomal protein L28 | polymer | 91 | 10069.1 | 1 | UniProt (O51325) Pfam (PF00830) In PDB | Borreliella burgdorferi B31 | |
50 | Aa | 50S ribosomal protein L29 | polymer | 65 | 7915.5 | 1 | UniProt (O51439) Pfam (PF00831) In PDB | Borreliella burgdorferi B31 | |
51 | Ab | 50S ribosomal protein uL30 | polymer | 100 | 11661.2 | 1 | Borreliella burgdorferi B31 | ||
52 | Ac | 50S ribosomal protein L31 type B | polymer | 81 | 9318.7 | 1 | UniProt (O51247) Pfam (PF01197) In PDB | Borreliella burgdorferi B31 | |
53 | Ad | 50S ribosomal protein L32 | polymer | 59 | 6960.2 | 1 | UniProt (O51646) Pfam (PF01783) In PDB | Borreliella burgdorferi B31 | |
54 | Ae | 50S ribosomal protein L33 | polymer | 51 | 6100.3 | 1 | UniProt (O51357) Pfam (PF00471) In PDB | Borreliella burgdorferi B31 | |
55 | Af | 50S ribosomal protein L34 | polymer | 50 | 6059.4 | 1 | UniProt (P29220) Pfam (PF00468) In PDB | Borreliella burgdorferi B31 | |
56 | Ag | 50S ribosomal protein L35 | polymer | 66 | 7840.5 | 1 | UniProt (O51207) Pfam (PF01632) In PDB | Borreliella burgdorferi B31 | |
57 | Ah | 50S ribosomal protein L36 | polymer | 37 | 4418.6 | 1 | UniProt (O51452) Pfam (PF00444) In PDB | Borreliella burgdorferi B31 | |
58 | Ai | 50S ribosomal protein bL38 | polymer | 46 | 5351.3 | 1 | UniProt (O51184) In PDB | Borreliella burgdorferi B31 | |
59 | N, R, Ad, Ah | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) |
Sequence modifications
X: 1 - 76 (GenBank: AE000783.1)
AS: 2 - 115 (UniProt: O51206)
PDB | External Database | Details |
---|---|---|
- | U 206501 | deletion |
C 74 | U 206502 | conflict |
C 75 | U 206503 | conflict |
PDB | External Database | Details |
---|---|---|
Arg 40 | Unk 40 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 58 |
Total formula weight | 2227535.4 | |
Non-Polymers* | Number of molecules | 4 |
Total formula weight | 261.6 | |
All* | Total formula weight | 2227797.0 |