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8FL3

Human nuclear pre-60S ribosomal subunit (State I2)

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1BA60S ribosomal protein L12polymer16517847.61UniProt (P30050)
Pfam (PF03946)
Pfam (PF00298)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL11
2BB60S ribosomal protein L10apolymer21724879.41UniProt (P62906)
Pfam (PF00687)
In PDB
Homo sapiens (human)CSA-19,Large ribosomal subunit protein uL1,Neural precursor cell expressed developmentally down-regulated protein 6,NEDD-6
3BDRibosomal biogenesis protein LAS1Lpolymer73483153.71UniProt (Q9Y4W2)
Pfam (PF04031)
In PDB
Homo sapiens (human)Protein LAS1 homolog
4L15.8S rRNApolymer15750463.81GenBank (555853)Homo sapiens (human)
5L328S rRNApolymer50701641203.81GenBank (86475748)Homo sapiens (human)
6L45S rRNApolymer12138998.11GenBank (23898)Homo sapiens (human)
7L560S ribosomal protein L11polymer17820288.51UniProt (P62913)
Pfam (PF00281)
Pfam (PF00673)
In PDB
Homo sapiens (human)CLL-associated antigen KW-12,Large ribosomal subunit protein uL5
8L660S ribosomal protein L13polymer21124321.71UniProt (P26373)
Pfam (PF01294)
In PDB
Homo sapiens (human)Breast basic conserved protein 1,Large ribosomal subunit protein eL13
9L760S ribosomal protein L13apolymer20323633.41UniProt (P40429)
Pfam (PF00572)
In PDB
Homo sapiens (human)23 kDa highly basic protein,Large ribosomal subunit protein uL13
10L860S ribosomal protein L14polymer21523485.01UniProt (P50914)
Pfam (PF01929)
In PDB
Homo sapiens (human)CAG-ISL 7,Large ribosomal subunit protein eL14
11L960S ribosomal protein L15polymer20424207.31UniProt (P61313)
Pfam (PF00827)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL15
12LA60S ribosomal protein L17polymer18421443.21UniProt (P18621)
Pfam (PF00237)
In PDB
Homo sapiens (human)60S ribosomal protein L23,Large ribosomal subunit protein uL22,PD-1
13LB60S ribosomal protein L18polymer18821687.71UniProt (Q07020)
Pfam (PF17135)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL18
14LC60S ribosomal protein L18apolymer17620808.51UniProt (Q02543)
Pfam (PF01775)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL20
15LD60S ribosomal protein L19polymer19623535.31UniProt (P84098)
Pfam (PF01280)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL19
16LE60S ribosomal protein L21polymer16018610.01UniProt (P46778)
Pfam (PF01157)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL21
17LF60S ribosomal protein L22polymer12814813.01UniProt (P35268)
Pfam (PF01776)
In PDB
Homo sapiens (human)EBER-associated protein,EAP,Epstein-Barr virus small RNA-associated protein,Heparin-binding protein HBp15,Large ribosomal subunit protein eL22
18LG60S ribosomal protein L23polymer14014892.51UniProt (P62829)
Pfam (PF00238)
In PDB
Homo sapiens (human)60S ribosomal protein L17,Large ribosomal subunit protein uL14
19LH60S ribosomal protein L23apolymer15617740.21UniProt (P62750)
Pfam (PF03939)
Pfam (PF00276)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL23
20LI60S ribosomal protein L26polymer14517303.41UniProt (P61254)
Pfam (PF16906)
Pfam (PF00467)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL24
21LJ60S ribosomal protein L27polymer13615835.81UniProt (P61353)
Pfam (PF00467)
Pfam (PF01777)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL27
22LK60S ribosomal protein L27apolymer14816604.51UniProt (P46776)
Pfam (PF00828)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL15
23LL60S ribosomal protein L28polymer13715784.61UniProt (P46779)
Pfam (PF01778)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL28
24LN60S ribosomal protein L3polymer40346224.11UniProt (P39023)
Pfam (PF00297)
In PDB
Homo sapiens (human)HIV-1 TAR RNA-binding protein B,TARBP-B,Large ribosomal subunit protein uL3
25LO60S ribosomal protein L30polymer11512805.11UniProt (P62888)
Pfam (PF01248)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL30
26LP60S ribosomal protein L31polymer12514494.91UniProt (P62899)
Pfam (PF01198)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL31
27LQ60S ribosomal protein L32polymer13515898.91UniProt (P62910)
Pfam (PF01655)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL32
28LR60S ribosomal protein L34polymer11713326.11UniProt (P49207)
Pfam (PF01199)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL34
29LS60S ribosomal protein L35polymer12314593.61UniProt (P42766)
Pfam (PF00831)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL29
30LT60S ribosomal protein L35apolymer11012564.71UniProt (P18077)
Pfam (PF01247)
In PDB
Homo sapiens (human)Cell growth-inhibiting gene 33 protein,Large ribosomal subunit protein eL33
31LU60S ribosomal protein L36polymer10512290.91UniProt (Q9Y3U8)
Pfam (PF01158)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL36
32LW60S ribosomal protein L37polymer9711111.01UniProt (P61927)
Pfam (PF01907)
In PDB
Homo sapiens (human)G1.16
33LX60S ribosomal protein L37apolymer9210299.41UniProt (P61513)
Pfam (PF01780)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL43
34LY60S ribosomal protein L38polymer708238.91UniProt (P63173)
Pfam (PF01781)
In PDB
Homo sapiens (human)
35LZ60S ribosomal protein L39polymer516426.81UniProt (P62891)
Pfam (PF00832)
In PDB
Homo sapiens (human)
36NBGuanine nucleotide-binding protein-like 3polymer54962098.21UniProt (Q9BVP2)
Pfam (PF08701)
Pfam (PF01926)
In PDB
Homo sapiens (human)E2-induced gene 3 protein,Novel nucleolar protein 47,NNP47,Nucleolar GTP-binding protein 3,Nucleostemin
37NCNucleolar GTP-binding protein 2polymer73183796.11UniProt (Q13823)
Pfam (PF08153)
Pfam (PF01926)
In PDB
Homo sapiens (human)Autoantigen NGP-1
38NFRibosome biogenesis protein NSA2 homologpolymer26030136.71UniProt (O95478)
Pfam (PF01201)
In PDB
Homo sapiens (human)Hairy cell leukemia protein 1,TGF-beta-inducible nuclear protein 1
39NJNotchless protein homolog 1polymer48553387.11UniProt (Q9NVX2)
Pfam (PF08154)
Pfam (PF00400)
In PDB
Homo sapiens (human)
40NKProtein LLP homologpolymer12915268.41UniProt (Q9BRT6)
Pfam (PF10169)
In PDB
Homo sapiens (human)Protein LAPS18-like
41NLRibosome biogenesis protein NOP53polymer47854498.41UniProt (Q9NZM5)
Pfam (PF07767)
In PDB
Homo sapiens (human)Glioma tumor suppressor candidate region gene 2 protein,Protein interacting with carboxyl terminus 1,PICT-1,p60
42NPZinc finger protein 593polymer13415230.21UniProt (O00488)
Pfam (PF12171)
In PDB
Homo sapiens (human)Zinc finger protein T86
43NTProtein SDA1 homologpolymer68780005.51UniProt (Q9NVU7)
Pfam (PF08158)
Pfam (PF05285)
Pfam (PF21638)
In PDB
Homo sapiens (human)Nucleolar protein 130,SDA1 domain-containing protein 1,hSDA
44NUTestis-expressed protein 10polymer929105812.01UniProt (Q9NXF1)
Pfam (PF12333)
In PDB
Homo sapiens (human)
45NV, NWWD repeat-containing protein 18polymer43247459.12UniProt (Q9BV38)
Pfam (PF00400)
Pfam (PF14077)
In PDB
Homo sapiens (human)
46NX, NYProline-, glutamic acid- and leucine-rich protein 1polymer1130119786.62UniProt (Q8IZL8)
Pfam (PF08167)
Pfam (PF08166)
In PDB
Homo sapiens (human)Modulator of non-genomic activity of estrogen receptor,Transcription factor HMX3
47NZCoiled-coil domain-containing protein 86polymer36040312.71UniProt (Q9H6F5)
Pfam (PF03879)
In PDB
Homo sapiens (human)Cytokine-induced protein with coiled-coil domain
48SA60S ribosomal protein L4polymer42747804.61UniProt (P36578)
Pfam (PF00573)
Pfam (PF14374)
In PDB
Homo sapiens (human)60S ribosomal protein L1,Large ribosomal subunit protein uL4
49SB60S ribosomal protein L5polymer29734426.81UniProt (P46777)
Pfam (PF17144)
Pfam (PF14204)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL18
50SC60S ribosomal protein L6polymer28832810.21UniProt (Q02878)
Pfam (PF03868)
Pfam (PF01159)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL6,Neoplasm-related protein C140,Tax-responsive enhancer element-binding protein 107,TaxREB107
51SD60S ribosomal protein L7polymer24829291.01UniProt (P18124)
Pfam (PF08079)
Pfam (PF00327)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL30
52SE60S ribosomal protein L7apolymer26630061.81UniProt (P62424)
Pfam (PF01248)
In PDB
Homo sapiens (human)Large ribosomal subunit protein eL8,PLA-X polypeptide,Surfeit locus protein 3
53SF60S ribosomal protein L8polymer25728088.91UniProt (P62917)
Pfam (PF00181)
Pfam (PF03947)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL2
54SG60S ribosomal protein L9polymer19221899.51UniProt (P32969)
Pfam (PF00347)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL6
55SHMKI67 FHA domain-interacting nucleolar phosphoproteinpolymer29334285.31UniProt (Q9BYG3)
Pfam (PF00076)
Pfam (PF12196)
In PDB
Homo sapiens (human)Nucleolar phosphoprotein Nopp34,Nucleolar protein interacting with the FHA domain of pKI-67,hNIFK
56SI60S ribosomal protein L7-like 1polymer25529730.41UniProt (Q6DKI1)
Pfam (PF08079)
Pfam (PF00327)
In PDB
Homo sapiens (human)Large ribosomal subunit protein uL30-like 1
57SKEukaryotic translation initiation factor 6polymer24526620.01UniProt (P56537)
Pfam (PF01912)
In PDB
Homo sapiens (human)eIF-6,B(2)GCN homolog,B4 integrin interactor,CAB,p27(BBP)
58SMPescadillo homologpolymer58868114.71UniProt (O00541)
Pfam (PF06732)
Pfam (PF16589)
In PDB
Homo sapiens (human)
59SQmRNA turnover protein 4 homologpolymer23927602.51UniProt (Q9UKD2)
Pfam (PF00466)
Pfam (PF17777)
In PDB
Homo sapiens (human)Ribosome assembly factor MRTO4
60SRGTP-binding protein 4polymer63474107.81UniProt (Q9BZE4)
Pfam (PF17835)
Pfam (PF06858)
Pfam (PF08155)
In PDB
Homo sapiens (human)Chronic renal failure gene protein,GTP-binding protein NGB,Nucleolar GTP-binding protein 1
61SVProbable ribosome biogenesis protein RLP24polymer16319666.31UniProt (Q9UHA3)
Pfam (PF01246)
In PDB
Homo sapiens (human)Ribosomal L24 domain-containing protein 1,Ribosomal protein L24-like
62L3, LR, LT, LW, NC...MAGNESIUM IONnon-polymer24.3100Chemie (MG)
63LR, LW, LX, NP, SVZINC IONnon-polymer65.45Chemie (ZN)
64NCGUANOSINE-5'-TRIPHOSPHATEnon-polymer523.21Chemie (GTP)
65NC, SRPOTASSIUM IONnon-polymer39.12Chemie (K)
66SRGUANOSINE-5'-DIPHOSPHATEnon-polymer443.21Chemie (GDP)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains63
Total formula weight3749362.1
Non-Polymers*Number of molecules109
Total formula weight3802.1
All*Total formula weight3753164.2
*Water molecules are not included.

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PDB entries from 2024-07-17

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