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8FDU

Engineered human dynein motor domain in the microtubule-unbound state with LIS1 complex in the buffer containing ATP-Vi (local refined on AAA3-AAA5 and LIS1)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1ACytoplasmic dynein 1 heavy chain 1,Serine--tRNA ligasepolymer3126357459.11UniProt (Q14204)
UniProt (Q5SJX7)
Pfam (PF08393)
Pfam (PF03028)
Pfam (PF18198)
Pfam (PF18199)
Pfam (PF12774)
Pfam (PF17852)
Pfam (PF12775)
Pfam (PF22597)
Pfam (PF12780)
Pfam (PF12777)
Pfam (PF02403)
Pfam (PF12781)
In PDB
Homo sapiens (human)Cytoplasmic dynein heavy chain 1,Dynein heavy chain,cytosolic,Seryl-tRNA synthetase,SerRS,Seryl-tRNA(Ser/Sec) synthetase
2B, CPlatelet-activating factor acetylhydrolase IB subunit beta,Platelet-activating factor acetylhydrolase IB subunit beta,human LIS1 protein with a SNAP tagpolymer59866423.52UniProt (P43034)
Pfam (PF08513)
Pfam (PF00400)
In PDB
Homo sapiens (human)Lissencephaly-1 protein,LIS-1,PAF acetylhydrolase 45 kDa subunit,PAF-AH 45 kDa subunit,PAF-AH alpha,PAFAH alpha
3AADENOSINE-5'-DIPHOSPHATEnon-polymer427.22Chemie (ADP)
Sequence modifications
A: 3 - 1822 (UniProt: Q14204)
PDBExternal DatabaseDetails
Gly 1-expression tag
Ser 2-expression tag
A: 1823 - 1889 (UniProt: Q5SJX7)
A: 1890 - 3124 (UniProt: Q14204)
PDBExternal DatabaseDetails
Glu 3125-expression tag
Phe 3126-expression tag
B, C: 3 - 411 (UniProt: P43034)
PDBExternal DatabaseDetails
Gly 1-expression tag
Ser 2-expression tag
B, C: 412 - 598 (PDB: 8FDU)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight490306.2
Non-Polymers*Number of molecules2
Total formula weight854.4
All*Total formula weight491160.6
*Water molecules are not included.

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PDB entries from 2024-09-11

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