8F8O
Crystal Structure of the Succinyl-diaminopimelate Desuccinylase (DapE) from Acinetobacter baumannii in complex with Succinic and L-Lactic Acids
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B | Succinyl-diaminopimelate desuccinylase | polymer | 384 | 42263.6 | 2 | UniProt (A3M8H2) Pfam (PF01546) Pfam (PF07687) In PDB | Acinetobacter baumannii ATCC 17978 | SDAP desuccinylase,N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase |
| 2 | A, B | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) | |||
| 3 | A, B | SUCCINIC ACID | non-polymer | 118.1 | 2 | Chemie (SIN) | |||
| 4 | A, B | (2S)-2-HYDROXYPROPANOIC ACID | non-polymer | 90.1 | 2 | Chemie (2OP) | |||
| 5 | A | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 1 | Chemie (PGE) | |||
| 6 | B | TETRAETHYLENE GLYCOL | non-polymer | 194.2 | 1 | Chemie (PG4) | |||
| 7 | B | CITRIC ACID | non-polymer | 192.1 | 1 | Chemie (CIT) | |||
| 8 | water | water | 18.0 | 378 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 378 (UniProt: A3M8H2)
| PDB | External Database | Details |
|---|---|---|
| Glu 379 | - | expression tag |
| Asn 380 | - | expression tag |
| Leu 381 | - | expression tag |
| Tyr 382 | - | expression tag |
| Phe 383 | - | expression tag |
| Gln 384 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 84527.2 | |
| Non-Polymers* | Number of molecules | 11 |
| Total formula weight | 1214.5 | |
| All* | Total formula weight | 85741.7 |
