8F5W
Dihydropyrimidine Dehydrogenase (DPD) C671S Mutant Soaked with Dihydrothymine and NADPH Quasi-Anaerobically
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Dihydropyrimidine dehydrogenase [NADP(+)] | polymer | 1025 | 111587.3 | 4 | UniProt (Q28943) Pfam (PF14691) Pfam (PF07992) Pfam (PF01180) Pfam (PF14697) | Sus scrofa (pig) | DHPDHase,DPD,Dihydrothymine dehydrogenase,Dihydrouracil dehydrogenase |
| 2 | CA, DA, E, EA, F... (D, A, B, C) | IRON/SULFUR CLUSTER | non-polymer | 351.6 | 16 | Chemie (SF4) | |||
| 3 | GA, I, Q, Y (D, A, B, C) | FLAVIN-ADENINE DINUCLEOTIDE | non-polymer | 785.5 | 4 | Chemie (FAD) | |||
| 4 | HA, J, R, Z (D, A, B, C) | NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | non-polymer | 743.4 | 4 | Chemie (NAP) | |||
| 5 | AA, IA, K, T (C, D, A, B) | 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL | non-polymer | 458.4 | 4 | Chemie (FNR) | |||
| 6 | BA, JA, L, S (C, D, A, B) | THYMINE | non-polymer | 126.1 | 4 | Chemie (TDR) | |||
| 7 | KA, LA, MA, NA (A, B, C, D) | water | water | 18.0 | 977 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 1025 (UniProt: Q28943)
| PDB | External Database | Details |
|---|---|---|
| Asp 60 | Gly 60 | conflict |
| Ser 671 | Cys 671 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 446349.1 | |
| Non-Polymers* | Number of molecules | 32 |
| Total formula weight | 14080.0 | |
| All* | Total formula weight | 460429.1 |
