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8F29

Yeast ATP synthase in conformation-1 at pH 6

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(Y)
ATP synthase subunit 5, mitochondrialpolymer18720199.41UniProt (P09457)
Pfam (PF00213)
Saccharomyces cerevisiae (baker's yeast)ATP synthase chain 5,Oligomycin sensitivity conferral protein,OSCP
2B
(G)
ATP synthase subunit gamma, mitochondrialpolymer26128984.31UniProt (P38077)
Pfam (PF00231)
Saccharomyces cerevisiae (baker's yeast)F-ATPase gamma subunit
3C
(H)
ATP synthase subunit delta, mitochondrialpolymer13214080.91UniProt (Q12165)
Pfam (PF02823)
Pfam (PF21334)
Saccharomyces cerevisiae (baker's yeast)F-ATPase delta subunit
4D
(I)
ATP synthase subunit epsilon, mitochondrialpolymer596388.11UniProt (P21306)
Pfam (PF04627)
Saccharomyces cerevisiae (baker's yeast)ATPase subunit epsilon
5E
(Z)
ATP synthase subunit 4, mitochondrialpolymer15517562.01UniProt (P05626)
Pfam (PF05405)
Saccharomyces cerevisiae (baker's yeast)
6F
(7)
ATP synthase subunit d, mitochondrialpolymer17119509.21UniProt (P30902)
Pfam (PF05873)
Saccharomyces cerevisiae (baker's yeast)
7G
(6)
ATP synthase subunit H, mitochondrialpolymer8910090.91UniProt (Q12349)
Pfam (PF10775)
Saccharomyces cerevisiae (baker's yeast)
8H
(U)
ATP synthase subunit f, mitochondrialpolymer859383.81UniProt (Q06405)
Pfam (PF10791)
Saccharomyces cerevisiae (baker's yeast)
9I, J, K, L, M...
(S, T, K, L, M...)
ATP synthase subunit 9, mitochondrialpolymer757663.210UniProt (P61829)
Pfam (PF00137)
Saccharomyces cerevisiae (baker's yeast)Lipid-binding protein,Oligomycin resistance protein 1
10S
(8)
ATP synthase protein 8polymer415046.21UniProt (P00856)
Pfam (PF05933)
Saccharomyces cerevisiae (baker's yeast)A6L,ATP-associated protein 1,F-ATPase subunit 8
11T
(X)
ATP synthase subunit apolymer22425073.21UniProt (P00854)
Pfam (PF00119)
Saccharomyces cerevisiae (baker's yeast)F-ATPase protein 6
12U
(J)
ATP synthase subunit J, mitochondrialpolymer374145.91UniProt (P81450)
Pfam (PF04911)
Saccharomyces cerevisiae (baker's yeast)ATPase synthase I subunit
13V, W, X
(A, B, C)
ATP synthase subunit alpha, mitochondrialpolymer50754748.13UniProt (P07251)
Pfam (PF02874)
Pfam (PF00006)
Pfam (PF00306)
Saccharomyces cerevisiae (baker's yeast)
14AA, Y, Z
(D, E, F)
ATP synthase subunit beta, mitochondrialpolymer47350752.63UniProt (P00830)
Pfam (PF02874)
Pfam (PF00006)
Pfam (PF22919)
Saccharomyces cerevisiae (baker's yeast)
15BA, DA, FA, HA, KA
(A, B, C, D, F)
ADENOSINE-5'-DIPHOSPHATEnon-polymer427.25Chemie (ADP)
16CA, EA, GA, IA, LA
(A, B, C, D, F)
MAGNESIUM IONnon-polymer24.35Chemie (MG)
17JA
(D)
PHOSPHATE IONnon-polymer95.01Chemie (PO4)
Sequence modifications
Y: 7 - 193 (UniProt: P09457)
PDBExternal DatabaseDetails
Leu 168Ile 185conflict
Ile 188Asn 205conflict
G: 5 - 274 (UniProt: P38077)
PDBExternal DatabaseDetails
Asn 14Lys 47conflict
Ala 15Asn 48conflict
-Val 95deletion
-Glu 96deletion
-Ala 97deletion
-Thr 98deletion
-Glu 99deletion
-Thr 100deletion
-Gly 101deletion
-Ala 102deletion
-Pro 103deletion
Z: 53 - 207 (UniProt: P05626)
PDBExternal DatabaseDetails
Val 177Ile 212conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains27
Total formula weight553598.7
Non-Polymers*Number of molecules11
Total formula weight2352.5
All*Total formula weight555951.2
*Water molecules are not included.

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PDB entries from 2026-01-14

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