8F1I
SigN RNA polymerase early-melted intermediate bound to mismatch fragment dhsU36mm1 (-12T)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B (A, C) | DNA (36-MER) | polymer | 36 | 11071.2 | 2 | GenBank (AE000657.1) | Aquifex aeolicus | |
2 | C, D (G, H) | DNA-directed RNA polymerase subunit alpha | polymer | 329 | 36558.7 | 2 | UniProt (P0A7Z4) Pfam (PF01193) Pfam (PF01000) Pfam (PF03118) | Escherichia coli | RNAP subunit alpha,RNA polymerase subunit alpha,Transcriptase subunit alpha |
3 | E (I) | DNA-directed RNA polymerase subunit beta | polymer | 1342 | 150820.9 | 1 | UniProt (P0A8V2) Pfam (PF04560) Pfam (PF04563) Pfam (PF04561) Pfam (PF04565) Pfam (PF10385) Pfam (PF00562) | Escherichia coli | RNAP subunit beta,RNA polymerase subunit beta,Transcriptase subunit beta |
4 | F (J) | DNA-directed RNA polymerase subunit beta' | polymer | 1430 | 158105.7 | 1 | UniProt (P0A8T7) Pfam (PF04997) Pfam (PF00623) Pfam (PF04983) Pfam (PF05000) Pfam (PF04998) | Escherichia coli | RNAP subunit beta',RNA polymerase subunit beta',Transcriptase subunit beta' |
5 | G (K) | DNA-directed RNA polymerase subunit omega | polymer | 91 | 10249.5 | 1 | UniProt (P0A800) Pfam (PF01192) | Escherichia coli | RNAP omega subunit,RNA polymerase omega subunit,Transcriptase subunit omega |
6 | H (M) | RNA polymerase sigma-54 factor | polymer | 480 | 54406.9 | 1 | UniProt (P24255) Pfam (PF00309) Pfam (PF04963) Pfam (PF04552) | Escherichia coli | |
7 | I, J (B, D) | DNA (36-MER) | polymer | 36 | 11045.1 | 2 | GenBank (AE000657.1) | Aquifex aeolicus | |
8 | K (J) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
9 | L, M (J) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
10 | N, O, P (A, M, B) | water | water | 18.0 | 8 | Chemie (HOH) |
Sequence modifications
A, C: 1 - 36 (GenBank: AE000657.1)
J: 1 - 1407 (UniProt: P0A8T7)
M: 1 - 477 (UniProt: P24255)
PDB | External Database | Details |
---|---|---|
Dc 24 | Da 144241 | engineered mutation |
Dt 25 | Da 144242 | engineered mutation |
PDB | External Database | Details |
---|---|---|
Leu 1408 | - | expression tag |
Glu 1409 | - | expression tag |
Leu 1410 | - | expression tag |
Glu 1411 | - | expression tag |
Val 1412 | - | expression tag |
Leu 1413 | - | expression tag |
Phe 1414 | - | expression tag |
Gln 1415 | - | expression tag |
Gly 1416 | - | expression tag |
Pro 1417 | - | expression tag |
Ser 1418 | - | expression tag |
Ser 1419 | - | expression tag |
Gly 1420 | - | expression tag |
His 1421 | - | expression tag |
His 1422 | - | expression tag |
His 1423 | - | expression tag |
His 1424 | - | expression tag |
His 1425 | - | expression tag |
His 1426 | - | expression tag |
His 1427 | - | expression tag |
His 1428 | - | expression tag |
His 1429 | - | expression tag |
His 1430 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Ser -2 | - | expression tag |
Glu -1 | - | expression tag |
Phe 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 10 |
Total formula weight | 490932.9 | |
Non-Polymers* | Number of molecules | 3 |
Total formula weight | 155.1 | |
All* | Total formula weight | 491088.0 |