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8F1F

Structure of K48-linked tri-ubiquitin in complex with cyclic peptide

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, aUbiquitinpolymer778691.92UniProt (P0CG47)
Pfam (PF00240)
In PDB
Homo sapiens (human)
2B, bUbiquitinpolymer768576.82UniProt (P0CG47)
Pfam (PF00240)
In PDB
Homo sapiens (human)
3C, cUbiquitinpolymer768604.82UniProt (P0CG47)
Pfam (PF00240)
In PDB
Homo sapiens (human)
41, 2Non-proteinogenic cyclic peptide (inhibitor)polymer141487.72Homo sapiens
5AGLYCEROLnon-polymer92.11Chemie (GOL)
6B, b4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACIDnon-polymer238.32Chemie (EPE)
7waterwater18.0299Chemie (HOH)
Sequence modifications
A, a: 1 - 76 (UniProt: P0CG47)
PDBExternal DatabaseDetails
Asp 77-insertion
C, c: 1 - 76 (UniProt: P0CG47)
PDBExternal DatabaseDetails
Arg 48Lys 48engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight54722.7
Non-Polymers*Number of molecules3
Total formula weight568.7
All*Total formula weight55291.4
*Water molecules are not included.

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PDB entries from 2024-05-15

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