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8EZB

NHEJ Long-range complex with ATP

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, J
(A, J)
X-ray repair cross-complementing protein 6polymer60969945.02UniProt (P12956)
Pfam (PF03731)
Pfam (PF02735)
Pfam (PF03730)
Pfam (PF02037)
Homo sapiens (human)5'-deoxyribose-5-phosphate lyase Ku70,5'-dRP lyase Ku70,70 kDa subunit of Ku antigen,ATP-dependent DNA helicase 2 subunit 1,ATP-dependent DNA helicase II 70 kDa subunit,CTC box-binding factor 75 kDa subunit,CTCBF,DNA repair protein XRCC6,Lupus Ku autoantigen protein p70,Ku70,Thyroid-lupus autoantigen,TLAA,X-ray repair complementing defective repair in Chinese hamster cells 6
2B, K
(B, K)
X-ray repair cross-complementing protein 5polymer73282812.42UniProt (P13010)
Pfam (PF03731)
Pfam (PF02735)
Pfam (PF03730)
Pfam (PF08785)
Homo sapiens (human)86 kDa subunit of Ku antigen,ATP-dependent DNA helicase 2 subunit 2,ATP-dependent DNA helicase II 80 kDa subunit,CTC box-binding factor 85 kDa subunit,CTCBF,DNA repair protein XRCC5,Ku80,Ku86,Lupus Ku autoantigen protein p86,Nuclear factor IV,Thyroid-lupus autoantigen,TLAA,X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
3C, L
(C, L)
DNA-dependent protein kinase catalytic subunitpolymer4128469673.22UniProt (P78527)
Pfam (PF08163)
Pfam (PF19704)
Pfam (PF02259)
Pfam (PF00454)
Pfam (PF02260)
Pfam (PF20502)
Homo sapiens (human)DNA-PKcs,DNPK1,p460
4D, M
(D, M)
DNA (31-MER)polymer319510.22Homo sapiens
5E, N
(E, N)
DNA (30-MER)polymer309237.02Homo sapiens
6F, G, O, P
(F, G, O, P)
DNA repair protein XRCC4polymer33638337.74UniProt (Q13426)
Pfam (PF06632)
Pfam (PF21924)
Pfam (PF21925)
Homo sapiens (human)X-ray repair cross-complementing protein 4
7H, I
(H, I)
Non-homologous end-joining factor 1polymer29933372.22UniProt (Q9H9Q4)
Pfam (PF09302)
Pfam (PF21928)
Homo sapiens (human)Protein cernunnos,XRCC4-like factor
8Q, R
(S, T)
Protein PAXXpolymer20421663.52UniProt (Q9BUH6)
Pfam (PF15384)
Homo sapiens (human)Paralog of XRCC4 and XLF,XRCC4-like small protein
9S, T
(X, Y)
DNA ligase 4polymer911104125.02UniProt (P49917)
Pfam (PF04675)
Pfam (PF01068)
Pfam (PF04679)
Pfam (PF00533)
Pfam (PF11411)
Homo sapiens (human)DNA ligase IV,Polydeoxyribonucleotide synthase [ATP] 4
10U, W
(C, L)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
11V, X
(C, L)
ADENOSINE-5'-TRIPHOSPHATEnon-polymer507.22Chemie (ATP)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains20
Total formula weight1754027.8
Non-Polymers*Number of molecules4
Total formula weight1063.0
All*Total formula weight1755090.8
*Water molecules are not included.

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PDB entries from 2024-11-06

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