8EKI
CryoEM structure of the Dsl1 complex bound to SNAREs Sec20 and Use1
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Protein transport protein SEC20 | polymer | 275 | 32244.3 | 1 | UniProt (P28791) Pfam (PF03908) In PDB | Saccharomyces cerevisiae S288C | |
2 | B | Protein transport protein USE1 | polymer | 212 | 24254.8 | 1 | UniProt (P53146) Pfam (PF09753) In PDB | Saccharomyces cerevisiae S288C | SNARE-like tail-anchored protein 1,Unconventional SNARE in the endoplasmic reticulum protein 1 |
3 | C | Protein transport protein TIP20 | polymer | 701 | 81253.1 | 1 | UniProt (P33891) Pfam (PF04437) In PDB | Saccharomyces cerevisiae S288C | |
4 | D | Protein transport protein SEC39 | polymer | 709 | 82483.8 | 1 | UniProt (Q12745) Pfam (PF08314) In PDB | Saccharomyces cerevisiae S288C | Dependent on SLY1-20 protein 3 |
5 | E | Protein transport protein DSL1 | polymer | 783 | 91445.1 | 1 | UniProt (P53847) Pfam (PF11988) Pfam (PF11989) In PDB | Saccharomyces cerevisiae S288C | Dependent on SLY1-20 protein 1 |
Sequence modifications
E: 1 - 754 (UniProt: P53847)
PDB | External Database | Details |
---|---|---|
Met -28 | - | initiating methionine |
Lys -27 | - | expression tag |
His -26 | - | expression tag |
His -25 | - | expression tag |
His -24 | - | expression tag |
His -23 | - | expression tag |
His -22 | - | expression tag |
His -21 | - | expression tag |
His -20 | - | expression tag |
Gly -19 | - | expression tag |
Ala -18 | - | expression tag |
Ala -17 | - | expression tag |
Gly -16 | - | expression tag |
Thr -15 | - | expression tag |
Ser -14 | - | expression tag |
Leu -13 | - | expression tag |
Tyr -12 | - | expression tag |
Lys -11 | - | expression tag |
Lys -10 | - | expression tag |
Ala -9 | - | expression tag |
Gly -8 | - | expression tag |
Glu -7 | - | expression tag |
Asn -6 | - | expression tag |
Leu -5 | - | expression tag |
Tyr -4 | - | expression tag |
Phe -3 | - | expression tag |
Gln -2 | - | expression tag |
Gly -1 | - | expression tag |
Ser 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 5 |
Total formula weight | 311681.0 | |
All* | Total formula weight | 311681.0 |