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8E6Z

Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, dC75 rut mimic RNA, Mg-ADP-BeF3, and NusG; TEC part

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
15NT DNApolymer6018377.81synthetic construct
26T DNApolymer6018446.81synthetic construct
37RNA with 18 nt long spacerpolymer3511075.31synthetic construct
4ADNA-directed RNA polymerase subunit betapolymer1342150820.91UniProt (P0A8V4)
Pfam (PF04563)
Pfam (PF04561)
Pfam (PF04565)
Pfam (PF10385)
Pfam (PF00562)
Pfam (PF04560)
UniProt (by SIFTS) (P0A8V2)
In PDB
Escherichia coliRNAP subunit beta,RNA polymerase subunit beta,Transcriptase subunit beta
5BDNA-directed RNA polymerase subunit beta'polymer1407155366.81UniProt (P0A8T7)
Pfam (PF00623)
Pfam (PF04983)
Pfam (PF05000)
Pfam (PF04998)
Pfam (PF04997)
In PDB
Escherichia coliRNAP subunit beta', RNA polymerase subunit beta', Transcriptase subunit beta'
6C, DDNA-directed RNA polymerase subunit alphapolymer32936558.72UniProt (P0A7Z4)
Pfam (PF01193)
Pfam (PF01000)
Pfam (PF03118)
In PDB
Escherichia coliRNAP subunit alpha,RNA polymerase subunit alpha,Transcriptase subunit alpha
7EDNA-directed RNA polymerase subunit omegapolymer9110249.51UniProt (P0A802)
Pfam (PF01192)
UniProt (by SIFTS) (P0A800)
In PDB
Escherichia coliRNAP omega subunit,RNA polymerase omega subunit,Transcriptase subunit omega
8FTranscription termination/antitermination protein NusGpolymer18120560.51UniProt (U9XYQ6)
Pfam (PF02357)
Pfam (PF00467)
UniProt (by SIFTS) (P0AFG0)
In PDB
Escherichia coli
9BMAGNESIUM IONnon-polymer24.31Chemie (MG)
10BZINC IONnon-polymer65.42Chemie (ZN)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains9
Total formula weight458015.0
Non-Polymers*Number of molecules3
Total formula weight155.1
All*Total formula weight458170.1
*Water molecules are not included.

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PDB entries from 2024-07-31

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