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8DXE

HIV-1 reverse transcriptase/rilpivirine with bound fragment 2-amino-6-fluorobenzonitrile at the NNRTI adjacent site

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Reverse transcriptase/ribonuclease Hpolymer55763989.21UniProt (P03366)
Pfam (PF00078)
Pfam (PF06817)
Pfam (PF06815)
Pfam (PF00075)
Human immunodeficiency virus type 1 group M subtype B (isolate BH10) (HIV-1)Exoribonuclease H, p66 RT
2B
(B)
p51 RTpolymer42850039.51UniProt (P03366)
Pfam (PF00078)
Pfam (PF06817)
Pfam (PF06815)
Human immunodeficiency virus type 1 group M subtype B (isolate BH10) (HIV-1)
3C
(A)
2-amino-6-fluorobenzonitrilenon-polymer136.11Chemie (0IF)
4D
(A)
4-{[4-({4-[(E)-2-cyanoethenyl]-2,6-dimethylphenyl}amino)pyrimidin-2-yl]amino}benzonitrilenon-polymer366.41Chemie (T27)
5E, F, G, L, M...
(A, B)
DIMETHYL SULFOXIDEnon-polymer78.17Chemie (DMS)
6H, I, P
(A, B)
1,2-ETHANEDIOLnon-polymer62.13Chemie (EDO)
7J
(A)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
8K, Q
(A, B)
SULFATE IONnon-polymer96.12Chemie (SO4)
9R, S
(A, B)
waterwater18.0652Chemie (HOH)
Sequence modifications
A: 1 - 555 (UniProt: P03366)
PDBExternal DatabaseDetails
Met -1-expression tag
Val 0-expression tag
Ala 172Lys 771engineered mutation
Ala 173Lys 772engineered mutation
Ser 280Cys 879engineered mutation
B: 1 - 428 (UniProt: P03366)
PDBExternal DatabaseDetails
Ser 280Cys 879engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight114028.7
Non-Polymers*Number of molecules15
Total formula weight1452.1
All*Total formula weight115480.8
*Water molecules are not included.

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PDB entries from 2025-07-16

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