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8DVF

T4 Bacteriophage primosome with single strand DNA, state 1

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D, E...DnaB-like replicative helicasepolymer47553662.86UniProt (P04530)
Pfam (PF03796)
In PDB
Escherichia phage T4Gene product 41,Gp41
2MDNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3')polymer123605.41Escherichia phage T4
3HDNA primasepolymer34239842.01UniProt (P04520)
In PDB
Escherichia phage T4DNA priming protein
4TDNA (5'-D(P*GP*GP*CP*TP*G)-3')polymer51536.01Escherichia phage T4
5B, C, D, E, FPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTERnon-polymer523.25Chemie (AGS)
6B, C, D, E, FMAGNESIUM IONnon-polymer24.35Chemie (MG)
Sequence modifications
A, B, C, D, E, F: 1 - 432 (UniProt: P04530)
PDBExternal DatabaseDetails
Gln 433-expression tag
Asp 434-expression tag
Ser 435-expression tag
Thr 436-expression tag
Pro 437-expression tag
Thr 438-expression tag
Glu 439-expression tag
Val 440-expression tag
Asn 441-expression tag
Glu 442-expression tag
Val 443-expression tag
Ala 444-expression tag
Gly 445-expression tag
Ser 446-expression tag
Gln 447-expression tag
Gln 448-expression tag
Ile 449-expression tag
Gln 450-expression tag
Ala 451-expression tag
Glu 452-expression tag
Gln 453-expression tag
Asn 454-expression tag
Arg 455-expression tag
Tyr 456-expression tag
Gln 457-expression tag
Arg 458-expression tag
Asn 459-expression tag
Glu 460-expression tag
Ser 461-expression tag
Thr 462-expression tag
Arg 463-expression tag
Ala 464-expression tag
Gln 465-expression tag
Leu 466-expression tag
Asp 467-expression tag
Ala 468-expression tag
Leu 469-expression tag
Ala 470-expression tag
Asn 471-expression tag
Glu 472-expression tag
Leu 473-expression tag
Lys 474-expression tag
Phe 475-expression tag
H: 3 - 341 (UniProt: P04520)
PDBExternal DatabaseDetails
Met 1-initiating methionine
Ser 2-expression tag
Ile 342-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains9
Total formula weight366960.5
Non-Polymers*Number of molecules10
Total formula weight2737.8
All*Total formula weight369698.3
*Water molecules are not included.

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PDB entries from 2024-05-15

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