8DVF
T4 Bacteriophage primosome with single strand DNA, state 1
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | DnaB-like replicative helicase | polymer | 475 | 53662.8 | 6 | UniProt (P04530) Pfam (PF03796) | Escherichia phage T4 | Gene product 41,Gp41 |
| 2 | G (M) | DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3') | polymer | 12 | 3605.4 | 1 | Escherichia phage T4 | ||
| 3 | H (H) | DNA primase | polymer | 342 | 39842.0 | 1 | UniProt (P04520) | Escherichia phage T4 | DNA priming protein |
| 4 | I (T) | DNA (5'-D(P*GP*GP*CP*TP*G)-3') | polymer | 5 | 1536.0 | 1 | Escherichia phage T4 | ||
| 5 | J, L, N, P, R (B, C, D, E, F) | PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER | non-polymer | 523.2 | 5 | Chemie (AGS) | |||
| 6 | K, M, O, Q, S (B, C, D, E, F) | MAGNESIUM ION | non-polymer | 24.3 | 5 | Chemie (MG) |
Sequence modifications
A, B, C, D, E, F: 1 - 432 (UniProt: P04530)
H: 3 - 341 (UniProt: P04520)
| PDB | External Database | Details |
|---|---|---|
| Gln 433 | - | expression tag |
| Asp 434 | - | expression tag |
| Ser 435 | - | expression tag |
| Thr 436 | - | expression tag |
| Pro 437 | - | expression tag |
| Thr 438 | - | expression tag |
| Glu 439 | - | expression tag |
| Val 440 | - | expression tag |
| Asn 441 | - | expression tag |
| Glu 442 | - | expression tag |
| Val 443 | - | expression tag |
| Ala 444 | - | expression tag |
| Gly 445 | - | expression tag |
| Ser 446 | - | expression tag |
| Gln 447 | - | expression tag |
| Gln 448 | - | expression tag |
| Ile 449 | - | expression tag |
| Gln 450 | - | expression tag |
| Ala 451 | - | expression tag |
| Glu 452 | - | expression tag |
| Gln 453 | - | expression tag |
| Asn 454 | - | expression tag |
| Arg 455 | - | expression tag |
| Tyr 456 | - | expression tag |
| Gln 457 | - | expression tag |
| Arg 458 | - | expression tag |
| Asn 459 | - | expression tag |
| Glu 460 | - | expression tag |
| Ser 461 | - | expression tag |
| Thr 462 | - | expression tag |
| Arg 463 | - | expression tag |
| Ala 464 | - | expression tag |
| Gln 465 | - | expression tag |
| Leu 466 | - | expression tag |
| Asp 467 | - | expression tag |
| Ala 468 | - | expression tag |
| Leu 469 | - | expression tag |
| Ala 470 | - | expression tag |
| Asn 471 | - | expression tag |
| Glu 472 | - | expression tag |
| Leu 473 | - | expression tag |
| Lys 474 | - | expression tag |
| Phe 475 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Met 1 | - | initiating methionine |
| Ser 2 | - | expression tag |
| Ile 342 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 9 |
| Total formula weight | 366960.5 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 2737.8 | |
| All* | Total formula weight | 369698.3 |
