8DPM
Structure of EBOV GP lacking the mucin-like domain with 9.20.1A2 Fab and 6D6 scFv bound
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, F, K (F, A, K) | Glycoprotein GP1 | polymer | 280 | 31297.2 | 3 | UniProt (Q05320) Pfam (PF01611) | Ebola virus - Mayinga Zaire 1976 | |
| 2 | B, G, L (G, B, L) | Glycoprotein GP2 | polymer | 136 | 15335.4 | 3 | UniProt (A0A0E3H7K2) Pfam (PF22307) UniProt (by SIFTS) (Q05320) | Ebola virus - Mayinga Zaire 1976 | |
| 3 | C, H, M (H, C, M) | Antibody 6D6 scFv | polymer | 243 | 25853.5 | 3 | Mus musculus | ||
| 4 | D, I, N (I, D, N) | Antibody 9.20.1A2 Fab heavy chain | polymer | 122 | 13340.0 | 3 | Homo sapiens | ||
| 5 | E, J, O (J, E, O) | Antibody 9.20.1A2 Fab light chain | polymer | 112 | 11985.1 | 3 | Homo sapiens | ||
| 6 | P, Q, R (P, Q, R) | alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1073.0 | 3 | In PDB GlyTouCan (G09724ZC) | |||
| 7 | S, T, U (F, A, K) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 3 | Chemie (NAG) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 15 |
| Total formula weight | 293433.4 | |
| Branched | Number of molecules | 3 |
| Total formula weight | 3218.9 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 663.6 | |
| All* | Total formula weight | 297315.9 |
