8DNX
Cryo-EM structure of the human Sec61 complex inhibited by cotransin
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (B) | Protein transport protein Sec61 subunit gamma | polymer | 68 | 7752.3 | 1 | UniProt (P60059) Pfam (PF00584) | Homo sapiens (human) | |
| 2 | B (C) | Protein transport protein Sec61 subunit beta | polymer | 96 | 9987.5 | 1 | UniProt (P60468) Pfam (PF03911) | Homo sapiens (human) | |
| 3 | C (A) | Protein transport protein Sec61 subunit alpha isoform 1 | polymer | 476 | 52202.4 | 1 | UniProt (P61619) Pfam (PF10559) Pfam (PF00344) | Homo sapiens (human) | Sec61 alpha-1 |
| 4 | D (D) | Cotransin analogue peptide inhibitor | polymer | 7 | 953.2 | 1 | synthetic construct |
Sequence modifications
A: 1 - 476 (UniProt: P61619)
| PDB | External Database | Details |
|---|---|---|
| Tyr 263 | Val 263 | conflict |
| Glu 264 | Asp 264 | engineered mutation |
| Arg 268 | Lys 268 | engineered mutation |
| Thr 270 | Ala 270 | engineered mutation |
| Lys 271 | Arg 271 | engineered mutation |
| Val 272 | Tyr 272 | engineered mutation |
| Ile 276 | Tyr 276 | engineered mutation |
| Gly 277 | Asn 277 | engineered mutation |
| Ile 278 | Thr 278 | engineered mutation |
| Pro 387 | Ala 387 | conflict |
| Arg 388 | Lys 388 | conflict |
| Ile 390 | Val 390 | conflict |
| Phe 394 | Leu 394 | engineered mutation |
| Asp 396 | Glu 396 | conflict |
| Gly 398 | Gln 398 | conflict |
| Ile 401 | Met 401 | engineered mutation |
| Asn 402 | Arg 402 | engineered mutation |
| Lys 404 | His 404 | engineered mutation |
| Ile 409 | Met 409 | engineered mutation |
| Tyr 410 | Val 410 | engineered mutation |
| Arg 411 | His 411 | engineered mutation |
| Lys 414 | Asn 414 | conflict |
| Lys 415 | Arg 415 | conflict |
| Ile 416 | Tyr 416 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 70895.4 | |
| All* | Total formula weight | 70895.4 |






