8DMS
Crystal structure of Legionella pneumophila macrodomain MavL in complex with ubiquitin vinyl methyl ester soaked with ADP-ribose
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B | MavL | polymer | 399 | 44180.7 | 2 | UniProt (Q5ZSJ1) In PDB | Legionella pneumophila | |
| 2 | C, D | Ubiquitin | polymer | 75 | 8519.8 | 2 | UniProt (P0CG47) Pfam (PF00240) In PDB | Homo sapiens (human) | |
| 3 | B | [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE | non-polymer | 559.3 | 1 | Chemie (AR6) | |||
| 4 | C | PENTAETHYLENE GLYCOL | non-polymer | 238.3 | 1 | Chemie (1PE) | |||
| 5 | C, D | METHYL 4-AMINOBUTANOATE | non-polymer | 117.1 | 2 | Chemie (GVE) | |||
| 6 | D | CITRATE ANION | non-polymer | 189.1 | 1 | Chemie (FLC) | |||
| 7 | water | water | 18.0 | 608 | Chemie (HOH) |
Sequence modifications
A, B: 42 - 435 (UniProt: Q5ZSJ1)
| PDB | External Database | Details |
|---|---|---|
| Gly 37 | - | expression tag |
| Pro 38 | - | expression tag |
| Leu 39 | - | expression tag |
| Gly 40 | - | expression tag |
| Ser 41 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 105400.9 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 1221.0 | |
| All* | Total formula weight | 106621.9 |
