8DML
Vibrio parahaemolyticus VtrA/VtrC complex bound to the bile salt chenodeoxycholate
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C, E, G | VtrA | polymer | 94 | 10982.5 | 4 | UniProt (Q87GI4) Pfam (PF22100) In PDB | Vibrio parahaemolyticus | |
2 | B, D, F, H | VtrC | polymer | 144 | 16918.8 | 4 | UniProt (Q87GI3) Pfam (PF22280) In PDB | Vibrio parahaemolyticus | |
3 | H, A, B, C, D | 1,2-ETHANEDIOL | non-polymer | 62.1 | 8 | Chemie (EDO) | |||
4 | B, D, F, H | CHENODEOXYCHOLIC ACID | non-polymer | 392.6 | 4 | Chemie (JN3) | |||
5 | B, D, F, H | TETRAETHYLENE GLYCOL | non-polymer | 194.2 | 4 | Chemie (PG4) | |||
6 | H, B, D, F | CALCIUM ION | non-polymer | 40.1 | 4 | Chemie (CA) | |||
7 | water | water | 18.0 | 260 | Chemie (HOH) |
Sequence modifications
A, C, E, G: 161 - 253 (UniProt: Q87GI4)
B, D, F, H: 31 - 161 (UniProt: Q87GI3)
PDB | External Database | Details |
---|---|---|
Met 160 | - | initiating methionine |
PDB | External Database | Details |
---|---|---|
Met 18 | - | initiating methionine |
Gly 19 | - | expression tag |
Ser 20 | - | expression tag |
Ser 21 | - | expression tag |
His 22 | - | expression tag |
His 23 | - | expression tag |
His 24 | - | expression tag |
His 25 | - | expression tag |
His 26 | - | expression tag |
His 27 | - | expression tag |
Ser 28 | - | expression tag |
Gln 29 | - | expression tag |
Asp 30 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 8 |
Total formula weight | 111605.0 | |
Non-Polymers* | Number of molecules | 20 |
Total formula weight | 3004.0 | |
All* | Total formula weight | 114609.1 |