8DL1
BoGH13ASus-E523Q from Bacteroides ovatus bound to maltoheptaose
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Alpha amylase, catalytic domain protein | polymer | 738 | 84054.6 | 4 | UniProt (A7M087) | Bacteroides ovatus ATCC 8483 | |
| 2 | E, F, G, H, I (G, H, I, J, K) | alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose | branched | 828.7 | 5 | In PDB GlyTouCan (G50146AM) | |||
| 3 | J, K (L, M) | alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose | branched | 504.4 | 2 | In PDB GlyTouCan (G96370VA) | |||
| 4 | L (N) | alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose | branched | 666.6 | 1 | In PDB GlyTouCan (G87171PZ) | |||
| 5 | M (O) | alpha-D-glucopyranose-(1-4)-[alpha-D-glucopyranose-(1-6)]alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose | branched | 1153.0 | 1 | In PDB | |||
| 6 | N (P) | alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-6)-[alpha-D-glucopyranose-(1-4)]alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose | branched | 1153.0 | 1 | In PDB | |||
| 7 | O (Q) | alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose | branched | 990.9 | 1 | In PDB | |||
| 8 | P (R) | alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose | branched | 828.7 | 1 | In PDB GlyTouCan (G15963LE) | |||
| 9 | AA, AB, AC, BB, BC... (A, B, C, D) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 55 | Chemie (EDO) | |||
| 10 | GC, IA, JA, LA, R (D, A) | ACETATE ION | non-polymer | 59.0 | 5 | Chemie (ACT) | |||
| 11 | BA, CC, QB, VA (A, D, C, B) | CALCIUM ION | non-polymer | 40.1 | 4 | Chemie (CA) | |||
| 12 | CA, DC, RB, WA (A, D, C, B) | MANGANESE (II) ION | non-polymer | 54.9 | 4 | Chemie (MN) | |||
| 13 | JB (C) | PENTAETHYLENE GLYCOL | non-polymer | 238.3 | 1 | Chemie (1PE) | |||
| 14 | KB (C) | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 1 | Chemie (PGE) | |||
| 15 | SB (C) | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
| 16 | UB (C) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
| 17 | EC (D) | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
| 18 | LC, MC, NC, OC (A, B, C, D) | water | water | 18.0 | 1887 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 22 - 758 (UniProt: A7M087)
| PDB | External Database | Details |
|---|---|---|
| Gly 21 | - | expression tag |
| Gln 523 | Glu 523 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 336218.6 | |
| Branched | Number of molecules | 12 |
| Total formula weight | 9944.6 | |
| Non-Polymers* | Number of molecules | 73 |
| Total formula weight | 4642.0 | |
| All* | Total formula weight | 350805.2 |
