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8DGU

Crystal structure of SARS-CoV-2 spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC25.106 isolated from a vaccinated COVID-19 convalescent

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Spike protein S2'polymer252981.31UniProt (P0DTC2)Severe acute respiratory syndrome coronavirus 2
2B
(H)
Antibody CC25.106 Fab heavy chainpolymer22023477.51Homo sapiens (human)
3C
(L)
Antibody CC25.106 Fab light chainpolymer21622830.21Homo sapiens (human)
4D, E
(H)
GLYCEROLnon-polymer92.12Chemie (GOL)
5F, G, H
(A, H, L)
waterwater18.0190Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight49288.9
Non-Polymers*Number of molecules2
Total formula weight184.2
All*Total formula weight49473.1
*Water molecules are not included.

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PDB entries from 2025-06-11

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