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8DFD

CryoEM structure of the 2:1 ADP-tetrafluoroaluminate stabilized nitrogenase complex from Azotobacter vinelandii

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(A, C)
Nitrogenase molybdenum-iron protein alpha chainpolymer49255363.02UniProt (P07328)
Pfam (PF00148)
Azotobacter vinelandiiDinitrogenase,Nitrogenase component I
2B, D
(B, D)
Nitrogenase molybdenum-iron protein beta chainpolymer52359535.92UniProt (P07329)
Pfam (PF11844)
Pfam (PF00148)
Azotobacter vinelandiiDinitrogenase, Nitrogenase component I
3E, F, G, H
(E, F, G, H)
Nitrogenase iron protein 1polymer29031548.24UniProt (P00459)
Pfam (PF00142)
Azotobacter vinelandiiNitrogenase Fe protein 1,Nitrogenase component II,Nitrogenase reductase
4I, M
(A, C)
iron-sulfur-molybdenum cluster with interstitial carbonnon-polymer787.52Chemie (ICS)
5J, N
(A, C)
3-HYDROXY-3-CARBOXY-ADIPIC ACIDnon-polymer206.22Chemie (HCA)
6K, O
(B, D)
FE(8)-S(7) CLUSTERnon-polymer671.22Chemie (CLF)
7L, P
(B, D)
FE (III) IONnon-polymer55.82Chemie (FE)
8AA, Q
(H, E)
IRON/SULFUR CLUSTERnon-polymer351.62Chemie (SF4)
9BA, R, U, X
(H, E, F, G)
ADENOSINE-5'-DIPHOSPHATEnon-polymer427.24Chemie (ADP)
10CA, S, V, Y
(H, E, F, G)
TETRAFLUOROALUMINATE IONnon-polymer103.04Chemie (ALF)
11DA, T, W, Z
(H, E, F, G)
MAGNESIUM IONnon-polymer24.34Chemie (MG)
12EA, FA, GA, HA, IA...
(A, B, C, D, E...)
waterwater18.01850Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight355990.8
Non-Polymers*Number of molecules22
Total formula weight6362.5
All*Total formula weight362353.3
*Water molecules are not included.

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PDB entries from 2025-06-18

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