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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

8D8L

Yeast mitochondrial small subunit assembly intermediate (State 3)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
10Probable S-adenosyl-L-methionine-dependent RNA methyltransferase RSM22, mitochondrialpolymer62872308.31UniProt (P36056)
Pfam (PF09243)
In PDB		Saccharomyces cerevisiae (baker's yeast)
2537S ribosomal protein MRP13, mitochondrialpolymer33939045.01UniProt (P12686)
In PDB		Saccharomyces cerevisiae (baker's yeast)Mitochondrial small ribosomal subunit protein mS44,YmS-A
3CRibosomal protein VAR1, mitochondrialpolymer39847171.01UniProt (P02381)
Pfam (PF05316)
In PDB		Saccharomyces cerevisiae (baker's yeast)Mitochondrial small ribosomal subunit protein uS3m
4M37S ribosomal protein SWS2, mitochondrialpolymer14316121.01UniProt (P53937)
Pfam (PF00416)
In PDB		Saccharomyces cerevisiae (baker's yeast)Mitochondrial small ribosomal subunit protein uS13m,Sick without securin protein 2
5N37S ribosomal protein MRP2, mitochondrialpolymer11513563.11UniProt (P10663)
Pfam (PF00253)
In PDB		Saccharomyces cerevisiae (baker's yeast)Mitochondrial small ribosomal subunit protein uS14m
6O37S ribosomal protein S28, mitochondrialpolymer28633116.41UniProt (P21771)
Pfam (PF00312)
In PDB		Saccharomyces cerevisiae (baker's yeast)Mitochondrial small ribosomal subunit protein uS15m
7P37S ribosomal protein S16, mitochondrialpolymer12113663.01UniProt (Q02608)
Pfam (PF00886)
In PDB		Saccharomyces cerevisiae (baker's yeast)Mitochondrial small ribosomal subunit protein bS16m
8Q37S ribosomal protein S17, mitochondrialpolymer23727684.01UniProt (Q03246)
Pfam (PF00366)
In PDB		Saccharomyces cerevisiae (baker's yeast)Mitochondrial small ribosomal subunit protein uS17m
9R37S ribosomal protein RSM18, mitochondrialpolymer13815866.51UniProt (P40033)
Pfam (PF01084)
In PDB		Saccharomyces cerevisiae (baker's yeast)Mitochondrial small ribosomal subunit protein bS18m
10S37S ribosomal protein S19, mitochondrialpolymer9110292.01UniProt (P53733)
Pfam (PF00203)
In PDB		Saccharomyces cerevisiae (baker's yeast)Mitochondrial small ribosomal subunit protein uS19m
11T37S ribosomal protein MRP21, mitochondrialpolymer17720432.71UniProt (P38175)
Pfam (PF01165)
In PDB		Saccharomyces cerevisiae (baker's yeast)Mitochondrial small ribosomal subunit protein bS21m
12U37S ribosomal protein S25, mitochondrialpolymer26430554.41UniProt (P40496)
Pfam (PF13741)
In PDB		Saccharomyces cerevisiae (baker's yeast)Mitochondrial small ribosomal subunit protein mS23
13V37S ribosomal protein PET123, mitochondrialpolymer31836059.31UniProt (P17558)
In PDB		Saccharomyces cerevisiae (baker's yeast)Mitochondrial small ribosomal subunit protein mS26
14W37S ribosomal protein S23, mitochondrialpolymer45050940.71UniProt (Q01163)
Pfam (PF10236)
In PDB		Saccharomyces cerevisiae (baker's yeast)DAP-3,Mitochondrial small ribosomal subunit protein mS29
15XMitochondrial 37S ribosomal protein S27polymer11012420.71UniProt (P53305)
Pfam (PF08293)
In PDB		Saccharomyces cerevisiae (baker's yeast)Mitochondrial small ribosomal subunit protein mS33
16Y37S ribosomal protein S24, mitochondrialpolymer31937458.51UniProt (Q03976)
Pfam (PF10213)
In PDB		Saccharomyces cerevisiae (baker's yeast)Mitochondrial ribosomal small subunit protein 24,Mitochondrial small ribosomal subunit protein mS35
17Z37S ribosomal protein MRP10, mitochondrialpolymer9510709.61UniProt (O75012)
Pfam (PF06747)
In PDB		Saccharomyces cerevisiae (baker's yeast)Mitochondrial small ribosomal subunit protein mS37,YmS-T
18A37S ribosomal protein MRP51, mitochondrialpolymer34439507.51UniProt (Q02950)
Pfam (PF11709)
In PDB		Saccharomyces cerevisiae (baker's yeast)Mitochondrial small ribosomal subunit protein bS1m
19B37S ribosomal protein MRP4, mitochondrialpolymer39444205.71UniProt (P32902)
Pfam (PF00318)
In PDB		Saccharomyces cerevisiae (baker's yeast)Mitochondrial small ribosomal subunit protein uS2m
202Protein FYV4, mitochondrialpolymer13015321.71UniProt (P38783)
Pfam (PF09597)
In PDB		Saccharomyces cerevisiae (baker's yeast)Function required for yeast viability protein 4,Mitochondrial small ribosomal subunit protein mS41
21337S ribosomal protein S26, mitochondrialpolymer26630257.41UniProt (P47141)
Pfam (PF02777)
In PDB		Saccharomyces cerevisiae (baker's yeast)Mitochondrial small ribosomal subunit protein mS42
22D37S ribosomal protein NAM9, mitochondrialpolymer48656450.91UniProt (P27929)
Pfam (PF01479)
In PDB		Saccharomyces cerevisiae (baker's yeast)Mitochondrial small ribosomal subunit protein uS4m,Nuclear accommodation of mitochondria protein 9
23437S ribosomal protein MRP1, mitochondrialpolymer32136775.81UniProt (P10662)
In PDB		Saccharomyces cerevisiae (baker's yeast)Mitochondrial small ribosomal subunit protein mS43
24E37S ribosomal protein S5, mitochondrialpolymer30734941.11UniProt (P33759)
Pfam (PF00333)
Pfam (PF03719)
In PDB		Saccharomyces cerevisiae (baker's yeast)Mitochondrial small ribosomal subunit protein uS5m
25F37S ribosomal protein MRP17, mitochondrialpolymer13115046.71UniProt (P28778)
Pfam (PF01250)
In PDB		Saccharomyces cerevisiae (baker's yeast)Mitochondrial small ribosomal subunit protein bS6m,YmS16
26637S ribosomal protein S35, mitochondrialpolymer34539638.21UniProt (P53292)
Pfam (PF12298)
In PDB		Saccharomyces cerevisiae (baker's yeast)Mitochondrial small ribosomal subunit protein mS45
27G37S ribosomal protein S7, mitochondrialpolymer24727857.11UniProt (P47150)
Pfam (PF00177)
In PDB		Saccharomyces cerevisiae (baker's yeast)Mitochondrial small ribosomal subunit protein uS7m
28H37S ribosomal protein S8, mitochondrialpolymer15517496.61UniProt (Q03799)
Pfam (PF00410)
In PDB		Saccharomyces cerevisiae (baker's yeast)Mitochondrial small ribosomal subunit protein uS8m
2983-hydroxyisobutyryl-CoA hydrolase, mitochondrialpolymer50056351.21UniProt (P28817)
Pfam (PF16113)
In PDB		Saccharomyces cerevisiae (baker's yeast)3-hydroxyisobutyryl-coenzyme A hydrolase,HIB-CoA hydrolase,HIBYL-CoA-H,Mitochondrial small ribosomal subunit protein mS47
30I37S ribosomal protein S9, mitochondrialpolymer27831980.31UniProt (P38120)
Pfam (PF00380)
In PDB		Saccharomyces cerevisiae (baker's yeast)Mitochondrial small ribosomal subunit protein uS9m
31a15S ribosomal RNApolymer1713549234.11GenBank (1887067169)Saccharomyces cerevisiae (baker's yeast)
32J37S ribosomal protein S10, mitochondrialpolymer20323458.91UniProt (Q03201)
Pfam (PF00338)
In PDB		Saccharomyces cerevisiae (baker's yeast)Mitochondrial small ribosomal subunit protein uS10m
33K37S ribosomal protein S18, mitochondrialpolymer21724603.41UniProt (P42847)
In PDB		Saccharomyces cerevisiae (baker's yeast)Mitochondrial small ribosomal subunit protein uS11m,YmS18
34cunknown protein sequencepolymer948017.91Saccharomyces cerevisiae (baker's yeast)
35L37S ribosomal protein S12, mitochondrialpolymer15316948.71UniProt (P53732)
Pfam (PF00164)
In PDB		Saccharomyces cerevisiae (baker's yeast)Mitochondrial small ribosomal subunit protein uS12m
360IRON/SULFUR CLUSTERnon-polymer351.61Chemie (SF4)
37WADENOSINE-5'-TRIPHOSPHATEnon-polymer507.21Chemie (ATP)
38a, L, W, BMAGNESIUM IONnon-polymer24.372Chemie (MG)
39waterwater18.03Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains35
Total formula weight1555499.5
Non-Polymers*Number of molecules74
Total formula weight2608.8
All*Total formula weight1558108.3
*Water molecules are not included.

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PDB entries from 2024-07-10

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